Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4454g00027 ATGGCTAGAGCTAGTACCAGTAACACACCATTGTACGCTTTGCTCTTGATTTCTTGGTTACTTTTTGCTTCACAGATCCATGCCTCCTCATCAGAGGCACTTGTAAGGCCTCCAATTGTGGACGGGCTCTCATGGAATTACTATTGGTTAACCTGTCCTAGGCTTGAAAGGATTGTCAGAAAGCATCTTCAGAAGGTGTTCAACCAGGATAGTGGTCAAGCTCCTGCCTTACTCAGGATCTTCTTCCATGACTGCTTCGTTCAGGGTTGCGATGGGTCGATATTATTGGATGGAACTCCAAATGAAAGAGATCAACCAGCAAACATAGGAATAAGGCCAGAGGCCTTGCAGACAATTGAAGACCTCCGATCTCTTGTCCACAGGCAGTGTGGAAGGGTCGTCTCCTGTGCTGACCTCATTGTTCTCGCCGCACGTGAGGCTGTTTCCCAATCAGGAGGCCCTGAATTTGACGTGCCACTGGGGAGAAAAGATGGCATAACCTTCAGCATAAATGGAACAAACAATCTTCCACCACCATTTTTCAAAACTGGTGAACTCCTTGACACTTTTGGAGCTAGAAACTTTGATGCCACAGATGTGGTTGCACTCTCTGGAGCACACAGTTTTGGTCGAGCCCACTGTAGCACTTTCTTTGACAGGATCAATCAATCAGACCCACCCATTGAGGAGTCCTTTGCCAACAATCTAAAGGGCATTTGCCCCAACGAAGACTCCACCAACACTTCTGTGCTGGACGTGAGAACCCCCAAGTTGTTTGATAACAAGTACTACATCAACCTTCTGAATCGCCAGGGTCTCTTTGTCTCGGATCAAGACCTGTTCAGTGACTCGAGGACTAAGGAAATAGTGAACTCCTTTGCTTCCAACCAGAAACTTTTCTTTGACAAGTTTGCCAATGCTATACTCAAGTTGAGCCAATTGGATGTGTTGACTGGAAAACAAGGACAAGTTCGTGCTAAATGCTCCTTCCCAAACACCAAGAAGAAATCTTTTGTTACCTCTGTGGTGGAAGAGGTGGTTGATTTAACTGGTCAGGTGTAA 1062 0.4614 MARASTSNTPLYALLLISWLLFASQIHASSSEALVRPPIVDGLSWNYYWLTCPRLERIVRKHLQKVFNQDSGQAPALLRIFFHDCFVQGCDGSILLDGTPNERDQPANIGIRPEALQTIEDLRSLVHRQCGRVVSCADLIVLAAREAVSQSGGPEFDVPLGRKDGITFSINGTNNLPPPFFKTGELLDTFGARNFDATDVVALSGAHSFGRAHCSTFFDRINQSDPPIEESFANNLKGICPNEDSTNTSVLDVRTPKLFDNKYYINLLNRQGLFVSDQDLFSDSRTKEIVNSFASNQKLFFDKFANAILKLSQLDVLTGKQGQVRAKCSFPNTKKKSFVTSVVEEVVDLTGQV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4454g00027 353 Gene3D Peroxidase, domain 2 178 312 - -
Gabi4454g00027 353 Gene3D - 46 329 - -
Gabi4454g00027 353 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 Pfam Peroxidase 59 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 ProSiteProfiles Plant heme peroxidase family profile. 42 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 SUPERFAMILY Heme-dependent peroxidases 37 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Gabi4454g00027 353 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Gabi4454g00027 353 CDD secretory_peroxidase 42 330 IPR033905 GO:0004601|GO:0042744
Gabi4454g00027 353 FunFam Peroxidase 177 311 - -
Gabi4454g00027 353 PANTHER - 22 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00027 353 FunFam Peroxidase 46 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4454g00027 Gabi-Chr4454 322351 324737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4454g00027 9 348 Peroxidase AT1G71695 50.141 2.89e-122 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4454g00027 K00430 - gmx:100804126 517.694