Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4454g00021 ATGTGCTTGTTAAAGGTGGCGCACCAAAGAGGTTCAGGCGAGTTCGTCAGGTTCACGGCGGAACACGGCGGAGGCGATGAGGAAGTGGAAGACACTTTTGGACAAGATGATGGGCCATCACAGTCACTAGGATTTAGTGAACCGGTGCAGCAAGGGGAGGTGGCATCAATGCCAGGGCATGTGGTTTCAGGGCACACCAGGGCTAGAGAGATGACGGCTGCGACGGTTTCGGCGCCGCCGCATGTCTTATCATCTGGCTATGGCCAGACCCACAGGGAGTGGGTCCAAAGAAGTGGTTTTCCTATGATGTCAGGTTTTATGCATGTCTCTTCTCCTCGTTTGTCTTCATCCAGTTCTGGCTCTCTTTTGGGGTCTGGCTCTGGTTCTAGTTCATGGGTTGGGCACAAAAGAGGGCGTGAAGATGAAAGTGGTGTAGGTGGTTCATCTCAGTTGATACAAGATGTGACTAGACTCTATACAAACATTGGTGACTTGGGACTACCATCTCAAGGACAGTCATCATCAATGAGAGAAGAAGCTACAACGATTGGGACCACAACCGCCGCCGCCGCCGCCACGACGGCACCGTCGAGTGAAACTGCATCATATGAAGAAACCGGCGAGAGGAGGAGAAGGTACAGAGGAGTGAGGCAGAGACCATGGGGGAAATGGGCAGCAGAGATTCGTGATCCTCACAAAGCGGCAAGAGTGTGGCTTGGAACATTCGAAACTGCAGAAGCTGCAGCAAGAGCTTACGATGAAGCTGCATTGAGATTCAGAGGTAACAGAGCAAAACTCAACTTCCCAGAAAACGTTACTGCAGCAATGCGACCACCACCTGCTCACGATTTTCCTATCGCCATTTCTGGTTCACCATCATTTAATTTGTTGCCGGCACCTCCTCTTCCGCCGCCGTTGCAGCCACCGTTCATGCAGAGACAACCTTTTCAGGGCTCCTCTGATTTGATGAGAGACTACTGGGAATATTCTCAGCTTCTGAAGAGCTCAGGTGACTTCCATGGACTTGAACAATGGTTCTATGATTCGCAAATGGCAGCGATTCAATCTTCATCTTCGTTGTTATCACCATCTTTGTCGTCTTCTTCATCACCAACTGCATTTTCTCCATCCAGTCAATTGTCCTCTGCTTCTTTTCCTCTGTCTTCTGGTCAGCAAGTGGGGTTTTTCCGGCCGCCGGGAGACCACTCTCGTGGCGGCGGTGACGGTGGTGGCGGGTCAAATTTTCCACCTTCGACATGGTCAGATACCAGTGGCTATCCTCCTCCCTCTGGTTGA 1296 0.5131 MCLLKVAHQRGSGEFVRFTAEHGGGDEEVEDTFGQDDGPSQSLGFSEPVQQGEVASMPGHVVSGHTRAREMTAATVSAPPHVLSSGYGQTHREWVQRSGFPMMSGFMHVSSPRLSSSSSGSLLGSGSGSSSWVGHKRGREDESGVGGSSQLIQDVTRLYTNIGDLGLPSQGQSSSMREEATTIGTTTAAAAATTAPSSETASYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVTAAMRPPPAHDFPIAISGSPSFNLLPAPPLPPPLQPPFMQRQPFQGSSDLMRDYWEYSQLLKSSGDFHGLEQWFYDSQMAAIQSSSSLLSPSLSSSSSPTAFSPSSQLSSASFPLSSGQQVGFFRPPGDHSRGGGDGGGGSNFPPSTWSDTSGYPPPSG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4454g00021 431 PRINTS Ethylene responsive element binding protein signature 213 224 IPR001471 GO:0003700|GO:0006355
Gabi4454g00021 431 PRINTS Ethylene responsive element binding protein signature 235 251 IPR001471 GO:0003700|GO:0006355
Gabi4454g00021 431 FunFam Ethylene-responsive transcription factor 2 211 270 - -
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 110 149 - -
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 22 46 - -
Gabi4454g00021 431 SMART rav1_2 212 275 IPR001471 GO:0003700|GO:0006355
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 186 202 - -
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 110 132 - -
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 360 431 - -
Gabi4454g00021 431 CDD AP2 220 271 IPR001471 GO:0003700|GO:0006355
Gabi4454g00021 431 Gene3D AP2/ERF domain 211 271 IPR036955 GO:0003700|GO:0006355
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 360 391 - -
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 186 211 - -
Gabi4454g00021 431 ProSiteProfiles AP2/ERF domain profile. 212 269 IPR001471 GO:0003700|GO:0006355
Gabi4454g00021 431 MobiDBLite consensus disorder prediction 414 431 - -
Gabi4454g00021 431 Pfam AP2 domain 212 261 IPR001471 GO:0003700|GO:0006355
Gabi4454g00021 431 PANTHER DNA-BINDING DOMAIN 181 356 IPR044808 GO:0003700|GO:0009873
Gabi4454g00021 431 SUPERFAMILY DNA-binding domain 212 270 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4454g00021 Gabi-Chr4454 247888 249646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4454g00021 171 272 AP2-EREBP Transcription Factor Family AT5G61890 58.654 3.80e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi4454g00021 AP2 5.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4454g00021 - - lja:Lj5g3v1937400.1 353.984