Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4454g00001 ATGGAAGGAAATTTGTCACAGGGAGGTATAATTCAAGGTGGATCTTCTTTTAGTGGCTTTGATTTGCCAGGATCAATTCGGGTTCATCATCAAGCACAGCATCCACATACCATGCACCAACATCAAACTCATCCACGTCAAGGGTCTTCTGTACATTCCTCAGTTCATGATGGTTTCCCACTTACGATGGGAACCTTGCCGAACTGTGACCAAACCATTTCATTGACAGACTTTAGTAAGGGAGACAGAAGCAAAAACTCCGCAAGTGAGGAAGATGAGCCAAGCTTTACTGACGATGGTGTTGATGGTCACCATGAAGCGGGTAGAGGGAAAAAAGGATCACCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTAAAGCTTCTGATAACAGCTGTTTCTTATATAGGAGAGGATGTAACTTCTGATGGTGGTGGCTGCGGAAGAAGGAAATTTGCAGTCCTACAGAAGAAGGGTAAGTGGAAATCTATTTCCAAGGTCATGGCTGAAAGGGGTTATCATGTTTCACCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATCATAGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCGCTGTTGGATGTAATAGATTATCTTTCTGAGAAGGAAAAGGATGATGTTCGAAAAATATTAAGCTCAAAACACCTGTTTTATGAGGAGATGTGTTCTTACCATAATGGCAATAGATTGCATTTACCCCATGATCCTGCATTGCAACGTTCACTGCAGTTAGCTCTCCGAAATAGAGATGATCATGATAACGATGATATCAGAAGGTACCATCATGATGATCATGATGAAGACGATCAAGATGTGGAATTTGACGATCATGATGACTTTGAAGAGAATTGTGCTTCCCATGGTGATAGTAGAGGAATATATGGGCCATTAGGTGGATCTATGAAGAAATTGAAACAAGGCCAATGCCAAGAAGATGCTAGTACTTTTGGTAATTCTTTAAATTGTCAGGATTACAACAAAAGTTCATATCCCCACGGGCAGATGGTCCAATCTGATGCGAGTCAAGTTTTACCTGAAAGCACGAGAACAGCTTGGTTACAGAAGCAGTGGAATGAATCTCGCTCACTTCAATTAGAAGAACAAAAGCTGCAAATTCAGGTTGAGATGTTGGAACTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGTAAGAGAAAGGACCGGGAGTTGGAGAAGCTGAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTGAAGCGAAAGGAAATGGGCACTGGCTTTAACTAG 1347 0.412 MEGNLSQGGIIQGGSSFSGFDLPGSIRVHHQAQHPHTMHQHQTHPRQGSSVHSSVHDGFPLTMGTLPNCDQTISLTDFSKGDRSKNSASEEDEPSFTDDGVDGHHEAGRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDVTSDGGGCGRRKFAVLQKKGKWKSISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDIIGRGTSCQVVENPALLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRNRDDHDNDDIRRYHHDDHDEDDQDVEFDDHDDFEENCASHGDSRGIYGPLGGSMKKLKQGQCQEDASTFGNSLNCQDYNKSSYPHGQMVQSDASQVLPESTRTAWLQKQWNESRSLQLEEQKLQIQVEMLELEKQRFKWQRFSKRKDRELEKLSLENERMKLENERIALELKRKEMGTGFN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4454g00001 448 Coils Coil 410 442 - -
Gabi4454g00001 448 Coils Coil 380 402 - -
Gabi4454g00001 448 Gene3D - 121 193 - -
Gabi4454g00001 448 MobiDBLite consensus disorder prediction 1 116 - -
Gabi4454g00001 448 PANTHER F16F4.11 PROTEIN-RELATED 1 445 - -
Gabi4454g00001 448 MobiDBLite consensus disorder prediction 83 116 - -
Gabi4454g00001 448 MobiDBLite consensus disorder prediction 42 56 - -
Gabi4454g00001 448 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Gabi4454g00001 448 MobiDBLite consensus disorder prediction 65 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4454g00001 Gabi-Chr4454 5228 9692 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi4454g00001 Myb_DNA-bind_4 1.8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4454g00001 - - gmx:100812134 759.214