Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4451g00006 ATGGGTTGCTTCCACTCCAAAACCCCACTTCTTCAATCTCTTCACGACCCACCCTCTCCTCACAAACCCGATCCAGGTAATGGGGATGATGTTGATGAAGTATGCCAAGTTCCAGTGTTCAAAGAGTACGCTCTGAATGAACTTCGAAGGGCAACCAATGAGTTCAGCACACATTACATTGTCTCCGAGAGTGGTGACAAAGCTCCCAATGTCGTCTACAGAGGCAAACTCGACAACAATCGCTTAGTTGCTGTTAAGCGCTTCTCCAAACTCTCTTGGCCTGATGCTCAACAGTTTCTGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTTGTAAATCTAATTGGTTCTTGTGCTGAGGGAGATGAACGCCTCTTGGTTGCTGACTACATGCCAAATGATACTCTCTCCAAACACCTTTTTCATTGGGACAAGCAGCCATTACCATGGGAAATGCGTCTTAGAATTGCATACCATGTTGCACAGGCACTAGATCATTGTAGCGTGGAAAACAGGAAAATATATCATGATTTGAATGCATACAGGATTCTTTTTGATGAGGATGGTGATCCCCATTTGTCAAGTTTTGGGCTTATGAAAAATAGTCGAGATGGAAAAAGCTATAGTACTAACTTAGCTTATACTCCACCTGAGTTTTTGCGAACGGGCAGGGTTATCCCAGAGAGTGTGATCTACAGTTATGGAACCATTCTTCTGGATCTTTTGAGTGGCAAGCATATTCCTCCAAGCCATGCTCTGGATCTGATAAGAGGGAAAAATTCATTGTTCTTGATGGACTCATCCCTCGAAGGGCAATACGCAAGTGATGACGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCTAGAGAACGGCCTGATATTAAGTTTTTGCTTACTGCAGTTGCTCCTCTTCAGCATCAGAAAGAGGTATCATCTCATGTCTTGATGGGCCTTACAAAAACTACAGCAGTACTGCCAACTATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGATATCTTGAACACAAAAAAGTTTGGGGATATTGCATTTAGAGACAAGGATTTCAAAAATGCAATTGAGTACTATTCAAAGGCTCTTGCTCTCTCGAAGCTGGGAATGGAAACTGATGCACAAGACATGCTTAATGATGGTGCAGCCTTTGAAGCAAAGAGGCCTATCAGCTGGCGTGGTTAA 1326 0.4329 MGCFHSKTPLLQSLHDPPSPHKPDPGNGDDVDEVCQVPVFKEYALNELRRATNEFSTHYIVSESGDKAPNVVYRGKLDNNRLVAVKRFSKLSWPDAQQFLAEAAGVGKVRHKRLVNLIGSCAEGDERLLVADYMPNDTLSKHLFHWDKQPLPWEMRLRIAYHVAQALDHCSVENRKIYHDLNAYRILFDEDGDPHLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIYSYGTILLDLLSGKHIPPSHALDLIRGKNSLFLMDSSLEGQYASDDATKLVELASKCLQFEARERPDIKFLLTAVAPLQHQKEVSSHVLMGLTKTTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKALALSKLGMETDAQDMLNDGAAFEAKRPISWRG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4451g00006 441 Gene3D Phosphorylase Kinase; domain 1 31 133 - -
Gabi4451g00006 441 ProSiteProfiles Protein kinase domain profile. 58 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4451g00006 441 FunFam probable serine/threonine-protein kinase At5g41260 135 326 - -
Gabi4451g00006 441 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 29 408 IPR045845 GO:0004672|GO:0009742
Gabi4451g00006 441 SUPERFAMILY Protein kinase-like (PK-like) 40 309 IPR011009 -
Gabi4451g00006 441 MobiDBLite consensus disorder prediction 1 31 - -
Gabi4451g00006 441 Pfam Protein kinase domain 71 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4451g00006 441 Gene3D Transferase(Phosphotransferase) domain 1 135 327 - -
Gabi4451g00006 441 FunFam probable serine/threonine-protein kinase At4g35230 30 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4451g00006 Gabi-Chr4451 62383 69204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4451g00006 27 312 Glycoside Hydrolase AT3G07070 33.866 8.25e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gabi4451g00006 Pkinase 1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4451g00006 K14500 - gmx:100793576 790.415