Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4451g00004 ATGGTGTTACTAGATTCCTTGTGGTTCATCGTAGTAGCATCTTTGTTGGGAGGATATGCATTTGTGTTTGGGATCCTTAGGAGGGTGAATGAGTGGTACTATGTTGGCAGGGTAGGAAAGACACAATACCCTCTCCCACCTGGTGATCTAGGTTGGCCTTTCCTCGGCAACATGCACACCTTCCTCAAAGCTTTCAAGTCTGACCCTGATTCCTTCATCTATGACCTTGTTTCCAGATATGGCAGGACAGGCATGTATAGGACCTACTTGTTTGGGAGCCCAAGCATCATAGTTTGCAGCCCAGAAACGTGTAGGAAGGTTCTCACAGATGAGGAACAATTCAAGCTTGGATACCCTGCTTCCACCATGGCCCTCACAGGAAAAAGATCATTCCATGGAATCTCAAATGAGGAGCACAAGCGTCTGCGCCGCCTCACAACCTCTCCCATAACTGGCCACGAGGCATTGTCTATGTATATTGGTCTTATTGAAGGGATTGCTGTGAAACTTTTGGATGAGTTGTCTAGCATGAACATGCCATGTGAATTCCTCACAGAAATGAGGAAGTTCGCTTTTGCTGTCATCACCACCATTTTTGTCGGCTCTGACTATGATCACGTTGACCTTGGCTTGGTCGAGAACTTGTACACCCACTTGAATCGAGGAATGAAGTCTCTTGCCATCAATCTCCCTGGCTTTGCATTCCACAAAGCACTCAAGGCACGAAAGAAGTTGATGAAGCTGCTTCAAGCCCTGGTGGACCGAAAGAGGAGGAACAATAATAGAGAGACAAAGATGAGGAAAGATATGATGGATTTATTGATGGAAGTCAAAGATGAAGTGGGTTGGAAGCTGCAGGATGAAGACATCATAGACCTGCTTCTGGTATTCTTGTTAGCTGGTCATGAAAGCTCTGCTCATGGAATATTGTGGACCATCATCTACCTCATGGAACACCCATATGTCCTCCATAAGGCCAAGAAAGAACAAGAACAAATCATGGAAAGGAGACCTTCCACGCAGAAAGGGCTGAACCTCAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATTGATGAGACGCTGCGCAGAACAAGTATCTCGTTTGCGAACTTTAGACAGGCAAAAGTCGATGTCAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTTTGGTTTGGAACAGAGGTGTTCACATGGATCCTGAAACTTACGTCAACCCAAAGGAATACGACCCTTCTAGATGGGAAAATTACAAAGCCAGAGCAGGGTCTTTCCTTCCATTTGGATTAGGAAGCAGGTTTTGTCCCGGAAGCGACCTGGCCAAGCTTGAGATCACCATTTTCCTTCATCATTTTCTTCTTAACTACAGGATGGAGAGAATTAATCCAGAGTGTCCAGTGACTTACCTACCAGTTCCAAGGCCTTCTGACAACTGTCTTGCAAGAATTATAAAAGCTACCTAA 1473 0.4467 MVLLDSLWFIVVASLLGGYAFVFGILRRVNEWYYVGRVGKTQYPLPPGDLGWPFLGNMHTFLKAFKSDPDSFIYDLVSRYGRTGMYRTYLFGSPSIIVCSPETCRKVLTDEEQFKLGYPASTMALTGKRSFHGISNEEHKRLRRLTTSPITGHEALSMYIGLIEGIAVKLLDELSSMNMPCEFLTEMRKFAFAVITTIFVGSDYDHVDLGLVENLYTHLNRGMKSLAINLPGFAFHKALKARKKLMKLLQALVDRKRRNNNRETKMRKDMMDLLMEVKDEVGWKLQDEDIIDLLLVFLLAGHESSAHGILWTIIYLMEHPYVLHKAKKEQEQIMERRPSTQKGLNLKEIKQMEYLSKVIDETLRRTSISFANFRQAKVDVNINGYTIPKGWKVLVWNRGVHMDPETYVNPKEYDPSRWENYKARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERINPECPVTYLPVPRPSDNCLARIIKAT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4451g00004 490 PANTHER CYTOCHROME P450 26 42 474 - -
Gabi4451g00004 490 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 CDD CYP90-like 77 486 - -
Gabi4451g00004 490 Pfam Cytochrome P450 46 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 Gene3D Cytochrome P450 36 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 SUPERFAMILY Cytochrome P450 43 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4451g00004 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4451g00004 Gabi-Chr4451 45593 49380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4451g00004 7 489 Cytochrome P450 AT2G32440 55.967 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4451g00004 K04123 K17875 qsu:112005461 697.582