Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4451g00002 ATGGGAAGTAGAAGTAATGGACTCTGCAACTTCTTTTCTTGCTTCAAAGCAGCGAACCGGACCCCTAACGAACCGCAACTCATCTTCGACGACTCTCAGCCATTGGATGAAACCCTAGGTCACTCATTCTGCTACGTCAGATCTTCGGCTCGTTTTCTTTCACCCACTAACTCCGATCGCTTTCTCTCTCCTTCTAATTCACTCCGTTCTTCTCCCTCCCACGAGCTCCTCCCCAGGACCCGACCCGATTTCCCCGAAACCGCATTCAAGGCCATTTCCGGAGCATCCGTCAGTGCCAACAGCTCCGCCCCGAAAACCGTTCTCCGTTTAGATAATAACACCCACGACGATGCCGCTTCCGGGGGTAATATTGTAAATGGCTTCAAAAGTACGTCGTCGTTTAGTGCTCTCCCGCTTCAGCCTGTTCCCAGAGGAGGAGGAGGAGGTGAAGCTGAATCATTGGACAGCGAGAGGAGGGGTTTCTTCCTCTCCGGTCCAATTGAGAACGCCGCCGGCACCCTCTCCGGTCCTCTCGACGACGGCGCCTCCGTTGACGCCGCCGCCGGTGGGGTACCTTTCTCGGCTCCCCTGGGTGGGCTGTATGTTAAGAAGGAGCGGAGGAATGGTGTTGGCAGGTTCCGGAAGGCGTTCCAGCGGAACCTTTCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTCATTGGGAGGAAGGAGGCTCCGGCGAGGGAAGGGACGACGGAGGCGAAGAGGGAGAGAGAGAGTAATGTGCAGTGGGCGCTCGGAAAGGCAGGGGAGGATCGAGTGCATGTGGTTGTATCGGAAGAGCAGGGTTGGTTGTTTGTGGGGATTTACGACGGCTTCAATGGCCCTGAGGCGCCGGAGTTTCTGATGGGTTATCTTTACCGTGCTGTTTACAGTGAGCTACAGGGTTTGTTTTGGGAAGTTGAAGAGGCGCAGGAAACTAACCCTGCACCTGCACCTGCAGTGCTTGCTGTTGCGGATGAAACTGAACCCAAAAATGAAGGGGGGGTTGAACGAGAACAAGACTCCAACCCTCTTCCGGGATCCGCCAAGAGAGTAACGTTTCAGGTAGAGGGAACTGGGAGTAACCGGCGTAGGCTATGGGAGTTTCTTGCGGAAGATGATGCTGAAGATGGGCTTGATCTTTCAGGGTCAGATAGATTTGCATTCTCCGTTGATGATGCACTCAGCGTTAGCAAGGAGGGGTCAGCAGGTAGTAGACGGTGGCTCCTGATGTCAAAGTTGAAGCATGGATTATCAAAGCATAAGGAGGGTCATGGAAGAAAGTTGTTACCTTGGAACTTGGGCACAGAGGATAAGGAGAAGGCTGAGGTGGAAAATCCGGCAGAGAAGTCCCGTGGTGGTGATAGTGGTAGGAAGCGGAAAGTGGGTCCTGTGGATCATGATTTGGTTTTGAGGGCATTGTCTCGGGCACTTGAGATGACTGAACTTGCATATTTAGATATGACGGACAAGGTTATTGATACGAACCCTGAGCTTGCTTTAATGGGATCATGCCTCTTAGTTGTTTTAATGAGGGATGAGGATGTTTATGTTATGAATGTGGGAGATAGCAGGGCCATTGTGGCACGTTATGAGTCCAGAGAGGTTAATTCTAGTAAGGAATCCGGAAGCAATGGAGATATTGGGTCAAGCAAGGAGAGTATAGTTGAGGAGTCTTTATCTCTGGGTGAAAGTGCTATCAAGTTGGGGAATGAGGGTCCTGCTCAAGAAACGAGGTTGGTGGCATTGCAGCTATCCACTGACCACAGCACGAGCATTGAAGAGGAAGTCATTAGGATTAAGAATGAACACCCTGATGATAGCCAATGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGCGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGTAGTACTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCTTATATATCCTGCTGCCCTTCACTACGTCACCATAGATTGAGCACGAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCGGATGGAGATCCTGCCCAAAGTTTAATAGAGGAGCTGCTCCTCCGTGCAGCCAAAAAAGCTGGAATGGATTTGCACGAGTTGTTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTCGAAGGAAGAATCTGGAAATCGTCAGGGACGTATCTCTGA 2319 0.5006 MGSRSNGLCNFFSCFKAANRTPNEPQLIFDDSQPLDETLGHSFCYVRSSARFLSPTNSDRFLSPSNSLRSSPSHELLPRTRPDFPETAFKAISGASVSANSSAPKTVLRLDNNTHDDAASGGNIVNGFKSTSSFSALPLQPVPRGGGGGEAESLDSERRGFFLSGPIENAAGTLSGPLDDGASVDAAAGGVPFSAPLGGLYVKKERRNGVGRFRKAFQRNLSEKKRPWVVPVLNFIGRKEAPAREGTTEAKRERESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPEAPEFLMGYLYRAVYSELQGLFWEVEEAQETNPAPAPAVLAVADETEPKNEGGVEREQDSNPLPGSAKRVTFQVEGTGSNRRRLWEFLAEDDAEDGLDLSGSDRFAFSVDDALSVSKEGSAGSRRWLLMSKLKHGLSKHKEGHGRKLLPWNLGTEDKEKAEVENPAEKSRGGDSGRKRKVGPVDHDLVLRALSRALEMTELAYLDMTDKVIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVARYESREVNSSKESGSNGDIGSSKESIVEESLSLGESAIKLGNEGPAQETRLVALQLSTDHSTSIEEEVIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLSTRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQSLIEELLLRAAKKAGMDLHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGTYL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4451g00002 772 MobiDBLite consensus disorder prediction 432 472 - -
Gabi4451g00002 772 SMART PP2C_4 251 758 IPR001932 -
Gabi4451g00002 772 Pfam Protein phosphatase 2C 486 543 IPR001932 -
Gabi4451g00002 772 Pfam Protein phosphatase 2C 573 728 IPR001932 -
Gabi4451g00002 772 PANTHER PROTEIN PHOSPHATASE 2C 250 759 IPR015655 GO:0004722|GO:0006470
Gabi4451g00002 772 MobiDBLite consensus disorder prediction 434 472 - -
Gabi4451g00002 772 CDD PP2Cc 476 760 IPR001932 -
Gabi4451g00002 772 Gene3D - 238 767 IPR036457 -
Gabi4451g00002 772 MobiDBLite consensus disorder prediction 338 363 - -
Gabi4451g00002 772 ProSiteProfiles PPM-type phosphatase domain profile. 252 760 IPR001932 -
Gabi4451g00002 772 SUPERFAMILY PP2C-like 264 761 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4451g00002 Gabi-Chr4451 20503 24924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4451g00002 1 772 PP2C-type Phosphatase Gene Family AT2G35350 55.122 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4451g00002 - - gmx:100775371 1110.9