Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4449g00002 ATGCCATTGATTGTGACAAGAGAAGAAAATGGATATGAGCCAAAAATTGGAATGATATTTTCATCTGAAGATGAAGCTTATAAGTTCTATAATGAATATGCTAAATTGACTGGTTTCACTGTGAGAAAAGCACAGTATCGAACATTAGCAGATGGGACCATAAGCCAAAGAATATTTGTTTGTGGAAGAGAAGGATATAGAAGGTTGAAGGATCCTTCACATGTGAAGAAAGTAAATAGGAGAGAAACAAGAACAGGTTGTCCAGCTATGATATGCTTTAAAATTGAGAGGGATAATTGGATTGTTTATAAATTCATTCCCGATCATAATCATGATCTTGTAAAATCATGCGCGCGAGCTATGCTAAGATCCCAAAGACATGTTGATGAAGCACATGCTAAAATGATTGAAGATATGGATAATGCTGGCATAAAACCATGTGGTATGTATTCATATTTTGTTGAAGTTGCAGGAGGACCCCAACATGTTGGATTTTTAAAACATGATTGTGATAATTTTTTACAAAGTAAAAGGAGCAACACTCTTGAAGCAGGAGATGCAAAAAGTGTTATTAACCATTTCAAAAAATTACAAGCAAATGATCCATCCTTTTTCTACACAATGCAAGTTGATCGTGAGAATCGCATGACTAATTTTTTTTTAGAGAGATGGCATATCAAGGACAGATTATAG 693 0.3434 MPLIVTREENGYEPKIGMIFSSEDEAYKFYNEYAKLTGFTVRKAQYRTLADGTISQRIFVCGREGYRRLKDPSHVKKVNRRETRTGCPAMICFKIERDNWIVYKFIPDHNHDLVKSCARAMLRSQRHVDEAHAKMIEDMDNAGIKPCGMYSYFVEVAGGPQHVGFLKHDCDNFLQSKRSNTLEAGDAKSVINHFKKLQANDPSFFYTMQVDRENRMTNFFLERWHIKDRL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4449g00002 230 PANTHER OS01G0519700 PROTEIN 6 220 - -
Gabi4449g00002 230 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4449g00002 Gabi-Chr4449 34082 34774 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi4449g00002 FAR1 4.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4449g00002 - - qsa:O6P43_013811 260.381