Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4443g00001 ATGGATTCAACAAACCTTGCTGAATTTTCATCTCAGAATTTGAAAGCATGTACCAACGATTTCAATGAGAGCAACCTCATTGGATTGACACAATTTGGAAGATTTTTTAGAGGCAACCTTGGAGGTCAATATGTAATAGTGAAGATATGGGATAGTGAAAAGTTGGAATGCTTAAGTTCCAAATATAATGATGAGTATTTGATTATCAGAGAGGAAATAAAATTTTGGACAAACCCAAAATTGAAAGGTTATCCTAAATTGGTGACCTTAATTGGTTATAGTTGGGAGAGAGATATAAAGGGGGTTGTTTATGATCTCAATCCACTTGACACATTGGGAAGTGTAATAATGAAAGATAGTCTGAATTGGCTTCAAAGAATAAAAGTAATTCATGAACTTGCGAAGATCTTAAAATTCATTCATGATCAGGAGAAGCAAAACATGGTGTTAAATATCAGTGCATCTCATATACTTCTTGACGAGGATTGCAGGCCAAAACTATTTGATTTGTTGTTGCTTAGCGAATTGAAAATGCCGAAGGAGCAATTAACAATGTCAACTAGTCATATTGATCCTTATTTTTCTCTAAGGGGTGGTGAATGGGATAAAAGCTCCGAAGTGTTTTCGTTTGGTATTGTTTTGCTTGAATTAGTAACCAAAAGAATATCAGACATTGTGAAGACAGAAAATGACACCCTAAACTTGGATAATCTAATACATATTTGGGCTAAAAAGGAGTACAAACCAAATTGTTCTTTTGTCCACAAAAATCTACAGGAAGATTGGCATTATTGTGCTGAAGATGGTGTTACAATAACTCTACTGGCGATGCAGTGCATAGAATTTTTTCCATCAAACCGTCCAACAATGAAGGATGTCTTACAGAGTCTAGATAATCTTTCAGTGTTACAACATTTGCATGATGCTAGACCAACAAAAAGGGAAAAGAACTTTGTTTTATCTTGA 966 0.3458 MDSTNLAEFSSQNLKACTNDFNESNLIGLTQFGRFFRGNLGGQYVIVKIWDSEKLECLSSKYNDEYLIIREEIKFWTNPKLKGYPKLVTLIGYSWERDIKGVVYDLNPLDTLGSVIMKDSLNWLQRIKVIHELAKILKFIHDQEKQNMVLNISASHILLDEDCRPKLFDLLLLSELKMPKEQLTMSTSHIDPYFSLRGGEWDKSSEVFSFGIVLLELVTKRISDIVKTENDTLNLDNLIHIWAKKEYKPNCSFVHKNLQEDWHYCAEDGVTITLLAMQCIEFFPSNRPTMKDVLQSLDNLSVLQHLHDARPTKREKNFVLS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4443g00001 321 PANTHER OS01G0588500 PROTEIN-RELATED 3 299 - -
Gabi4443g00001 321 Gene3D Phosphorylase Kinase; domain 1 1 106 - -
Gabi4443g00001 321 Gene3D Transferase(Phosphotransferase) domain 1 110 317 - -
Gabi4443g00001 321 ProSiteProfiles Protein kinase domain profile. 21 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4443g00001 321 Pfam Protein kinase domain 24 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4443g00001 321 SMART serkin_6 21 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4443g00001 321 SUPERFAMILY Protein kinase-like (PK-like) 6 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4443g00001 Gabi-Chr4443 7642 9684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4443g00001 6 318 Receptor kinase-like Gene Family AT1G53420 28.313 1.01e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gabi4443g00001 Pkinase 4.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4443g00001 - - gmx:102662076 499.204