Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4439g00002 ATGGAAGAAGTAGCATGGGCCACCACTGCATGCATGGTTGTTACGGTGATACTGACTCTGATAGGGGTATGGAAGATGCTGAACAGGTTGTGGCTGAGACCAAAGAAGCTGGAGATGCTGTTAAGAAAGCAAGGTCTTCGGGGCAGCCCATACAGGTTTTTGGTTGGGGATATAAAGGAAATGTTGAAGATGGGAAAGGAAGCCCAATCCAAACCCATGACTCTCTCTGATGATATAGTGCCGCGTGTAGTGTCATTTATACATCAAAAAATCAACAAACATGGCAAGAACACTTTTATCTGGTTTGGACCAACACCCAGGGTGATAATCACAGATCCTGAGCTCGTGAAAGATGTATTTTTCGGTTACCATGACTACCGAAAGGTTAGTATAAATCCTCTTGTCAGCAAGTTAATAGCTACTGGTCTTCTAAGTCATGAGGGTGAGAAGTGGCTCAAACACAGAAGGATTATCAACCCCGCATTCAATTTAGCAAAATTGAAGGTTATGTTACCAGCAATCTTTAAAAGTTGCTATGATATGATTAGCAAATGGGAGGACATGTTGTCTTCAGATGGATCGTGTGAAATGGATGTTTGGCCTTCCCTGCAGAATTTGGCTAGTGATGTTATTGCTCAAACAGCATTTGGAAGTAATTATGAAGATGGAAGAAGAATATTTCAACTTCAAAAAGAGCAAGCTGAACTTACAATGAAAATTATAATGAAAATTTTCATCCCTGGATGGAGGTTTCTACCTACTAGTACCCGTAGGAGGATGAAGGAAATTGACACAGAAATAGTAGCTTTACTGAAGGCTATGATTAACAAGCGAGAGAATGCACTGAAGGAGGGTGAAGCCACTAAGAATGATTTATTGGGTCAGCTTTTGGAATCAAATCGGACAGAAATTCAAAAGCATGGAAACAATAAGAATATGGGTATGACACTTCAAGATGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGTCGGAGAGTACTTCGGCTTTGCTTGTTTGGACTATGGTGTTAATGAGTAGATACCTTGATTGGCAAGAACGTGCAAGGGAGGAAGTGCTACAAGTCTTCGGCAAACAAAAACCAGATTTTGATGGACTAAGTCACCTTAAGATTGTCACCATGATTTTACACGAGGTTCTCAGGCTATACCCACCAGGAACTGTGCTTACTCGAACTGTTCACGAGGATAGGAAACTTGGGGACCTGACATTACCTGCTGGAGTGCAGGTTTCCTTGCCCATCGTTTTGGTTCACCATGACTCTAAACTCTGGGGTGATGATGCAAACGAGTTCAATCCAGCAAGGTTTTCTGAAGGAATTTCAAAGGTAACAAATGGTAAAGTTTCATTTTTTCCATTTGGTTGGGGTCCTAGAATATGCATTGGGCAAAATTTTGCCATGGTGGAAGCAAAGATGGCTCTGTCAATCATTCTGCAACATTTCTCCTTTGAACTTTCTCCAGCTTATGCTCATGCTCCAAGCGTTGTACGCACTCTTCAGCCACAATATGGTGCTCAACTCATTCTACGTAAACTGTGA 1563 0.4171 MEEVAWATTACMVVTVILTLIGVWKMLNRLWLRPKKLEMLLRKQGLRGSPYRFLVGDIKEMLKMGKEAQSKPMTLSDDIVPRVVSFIHQKINKHGKNTFIWFGPTPRVIITDPELVKDVFFGYHDYRKVSINPLVSKLIATGLLSHEGEKWLKHRRIINPAFNLAKLKVMLPAIFKSCYDMISKWEDMLSSDGSCEMDVWPSLQNLASDVIAQTAFGSNYEDGRRIFQLQKEQAELTMKIIMKIFIPGWRFLPTSTRRRMKEIDTEIVALLKAMINKRENALKEGEATKNDLLGQLLESNRTEIQKHGNNKNMGMTLQDVIEECKLFYFAGSESTSALLVWTMVLMSRYLDWQERAREEVLQVFGKQKPDFDGLSHLKIVTMILHEVLRLYPPGTVLTRTVHEDRKLGDLTLPAGVQVSLPIVLVHHDSKLWGDDANEFNPARFSEGISKVTNGKVSFFPFGWGPRICIGQNFAMVEAKMALSIILQHFSFELSPAYAHAPSVVRTLQPQYGAQLILRKL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4439g00002 520 Pfam Cytochrome P450 85 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Gabi4439g00002 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 513 - -
Gabi4439g00002 520 FunFam Cytochrome P450 734A1 31 520 - -
Gabi4439g00002 520 SUPERFAMILY Cytochrome P450 82 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4439g00002 520 CDD CYP72 84 516 - -
Gabi4439g00002 520 Gene3D Cytochrome P450 76 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4439g00002 Gabi-Chr4439 40259 44948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4439g00002 8 520 Cytochrome P450 AT3G14690 55.039 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4439g00002 - - gmx:100777623 780.015