Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00096 ATGTCAAGCACAAACATAAACAACATGCTTCTCCTTCTTCTCTTCCTTCTCACACTCTCAGCCATAACAACCCCTTCAACCTCCTCCACTGACTCTTTCATCTTCGGCGGTTGCTCCCAGCTGAAGTTCACGCCTGGTTCCTCTTACGAGAACGGCGTGAACTCGATCCTCACCTCCTTGGTCAACTCAGCCACGTTCACAAACTATAATAACTTCACCAATCAGGGCACCGCCGCGTCGGACACCGTCTACGGCCTCTTCCAGTGCCGTGGGGACCTCAGCAACGACCAGTGTTCTCGCTGCGTGGCGCGTGCGGTGAGTCAACTCGGCACACTCTGCTTCGGCTCGTGCGGCGGCGCGTTGCAGCTCGACGGCTGCTTCGTGAAGTACGATAATATCACGTTCCTTGGGGTGGAGGACAAGACGGTGGTGGTGAAGAAATGTGGGCCGTCGATTGGGTTGACCACAGATGCGTTGACCCGAAGGGATGCTGTGGTGGCGTATTTGCAGGCGTCGGATGGGACTTACAAAACGTTCAGGTCGAGTGGCTCTGGGAATATGCAAGGTGTGGCGCAGTGCACGGGAGATTTGAGTCCCAGCGAGTGCCAGGATTGCCTTTCCGATGCCATCCAACGGTTGAAAACGGACTGTGGGGCCTCCACCTGGGGAGAGATGTACTTGGCCAAGTGCTACGCGCGCTACTCGGAAGGTGGGAGCTACTCGCGCGGAAGTAACGCTGATAACAATCACAATGATGATGAGATTGAGAAGACACTCGCCATTCTAATTGGACTCATTGCTGGGGTTGCTCTAATCGTCGTTTTCCTTTCCTTCTTGTCCAAGGTGTGCGAAAAGCATAAAGGTGGTAAATAA 873 0.5407 MSSTNINNMLLLLLFLLTLSAITTPSTSSTDSFIFGGCSQLKFTPGSSYENGVNSILTSLVNSATFTNYNNFTNQGTAASDTVYGLFQCRGDLSNDQCSRCVARAVSQLGTLCFGSCGGALQLDGCFVKYDNITFLGVEDKTVVVKKCGPSIGLTTDALTRRDAVVAYLQASDGTYKTFRSSGSGNMQGVAQCTGDLSPSECQDCLSDAIQRLKTDCGASTWGEMYLAKCYARYSEGGSYSRGSNADNNHNDDEIEKTLAILIGLIAGVALIVVFLSFLSKVCEKHKGGK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00096 290 Gene3D - 156 237 IPR038408 -
Gabi4436g00096 290 Gene3D - 29 135 IPR038408 -
Gabi4436g00096 290 ProSiteProfiles Gnk2-homologous domain profile. 140 239 IPR002902 -
Gabi4436g00096 290 FunFam cysteine-rich repeat secretory protein 3 30 135 - -
Gabi4436g00096 290 FunFam Cysteine-rich repeat secretory protein 60 156 237 - -
Gabi4436g00096 290 Pfam Salt stress response/antifungal 38 132 IPR002902 -
Gabi4436g00096 290 Pfam Salt stress response/antifungal 177 235 IPR002902 -
Gabi4436g00096 290 ProSiteProfiles Gnk2-homologous domain profile. 31 135 IPR002902 -
Gabi4436g00096 290 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 10 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00096 Gabi-Chr4436 830894 833857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00096 13 235 Pollen Coat Proteome AT4G20670 24.481 3.96e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00096 - - gmx:100808107 448.743