Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00093 ATGGAGAGAGATTTCATGGGTCTGAGCTCAAAAGAACCACTAGCTGTGGTCAAAGAGGAGATGAATGATGATGGGTGCAACGACTCAGGCTTCACGAAGGGTTCGGTTGCACAATGGCCCTTCTCGAACAAAGTCTCTGCTCTTCCAAATCTGATGTCTTTCAAGAAATCTTTCAATCATGATGGGCAAGGTGGCTTTCATTTTTCGCTGGCTCCGTATCCTGCACAGCATGATATGAAGTATGTGACTTGTCCTCATGATGATGTGAAGACGTTTTCAGTTTCCTCTGGAAAGCCATTCCTGAAGAATCATTTTGCAACTGCTGCTCAGAATATGAATGGTACTAATGTGAAGCAGCCGCTACTTGGGGGAATACCTGTTGCAACGCCTCATTCGGTTCTTTCAACCATTGGTGCTGTTGCTGGAATGACCGAATCATGTAACAGTGTGAAACCATCTGCGCCTTTCCCCCAGCTTACCATCTTCTATGCTGGTGCTGTCAATGTCTTTGATGATATTTCTGCAGAGAAGGCACAAGCTATCATGTTGTTGGCTGGCAATGGCTTATCTGCAGCTTCTAACATGGCACAGCCAAAAGTTCCGGCACCTGGCTTGAAATTGGCAGCTGGTGATGGTGTGTCAGTGAGTCCCCCTGCAAATACACTACCCTGCTCTGCTGTTTCAAGTCCTCTGTCTATTTCATCACATACTGGTGCACAGTCAGGGAGTGGCTCAAGTAGCACTGATGAATTTTTGGCCGCCAAAACAACTGGAGTTCCTACCACTCCTGTTAGCAATGTCGAGCCTCCAAAAATAGTCAATGCAACCACTATGTTGACGTCAGCTGTGCCTCAGGCTCGTAAAGCATCCTTGGCTCGATTTTTAGAAAAGCGCAAGGAAAGGGTGATGAATGCAGCACCATATAACCTCAACAAGAAGTCTGAAGAGTGTACCACTGCAGAATACAATGGTGCTAACTTCTCTGCAAGTACTGCTACTAATACTATCTCAGTCAAGCAAGGATAG 1026 0.461 MERDFMGLSSKEPLAVVKEEMNDDGCNDSGFTKGSVAQWPFSNKVSALPNLMSFKKSFNHDGQGGFHFSLAPYPAQHDMKYVTCPHDDVKTFSVSSGKPFLKNHFATAAQNMNGTNVKQPLLGGIPVATPHSVLSTIGAVAGMTESCNSVKPSAPFPQLTIFYAGAVNVFDDISAEKAQAIMLLAGNGLSAASNMAQPKVPAPGLKLAAGDGVSVSPPANTLPCSAVSSPLSISSHTGAQSGSGSSSTDEFLAAKTTGVPTTPVSNVEPPKIVNATTMLTSAVPQARKASLARFLEKRKERVMNAAPYNLNKKSEECTTAEYNGANFSASTATNTISVKQG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00093 341 SMART tify_2 152 187 IPR010399 -
Gabi4436g00093 341 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 59 318 IPR040390 -
Gabi4436g00093 341 Pfam tify domain 158 186 IPR010399 -
Gabi4436g00093 341 ProSiteProfiles Tify domain profile. 152 187 IPR010399 -
Gabi4436g00093 341 Pfam Jas motif 284 308 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00093 Gabi-Chr4436 780128 783919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00093 39 314 Tify Gene Family AT3G17860 35.974 2.91e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi4436g00093 tify 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00093 K13464 - gmx:100807043 452.595