Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00091 ATGGAGAGAGATTTCATGGGTCTGAGCTCAAAAGAACCACTAGCTGTGGTCAAAGAGGAGATGAATGATGATGGGTGCAACGACTCAGGCTTCACGAAGGGTTCGGTTGCACAATGGCCCTTCTCGAACAAAGTCTCTGCTCTTCCAAATCTGATGTCTTTCAAGGTATCTCAAGATGATAAGACTAAAAATATGGTCTCTGATCCCATAACATCTACTGGGTTTTTGACTATTTTAAGTCAAGATGCATTTGACTCTAGTCAAAAACGCTCTGCTGGTGAACCACTGAAATCTTTCAATCATGATGGGCAAGGTGGCTTTCATTTTTCGCTGGCTCCGTATCCTGCACAGCATGATATGAAGTATGTGACTTGTCCTCATGATGATGTGAAGACGTTTTCAGTTTCCTCTGGAAAGCCATTCCTGAAGAATCATTTTGCAACTGCTGCTCAGAATATGAATGGTACTAATGTGAAGCAGCCGCTACTTGGGGGAATACCTGTTGCAACGCCTCATTCGGTTCTTTCAACCATTGGTGCTGTTGCTGGAATGACCGAATCATGTAACAGTGTGAAACCATCTGCGCCTTTCCCCCAGCTTACCATCTTCTATGCTGGTGCTGTCAATGTCTTTGATGATATTTCTGCAGAGAAGGCACAAGCTATCATGTTGTTGGCTGGCAATGGCTTATCTGCAGCTTCTAACATGGCACAGCCAAAAGTTCCGGCACCTGGCTTGAAATTGGCAGCTGGTGATGGTGTGTCAGTGAGTCCCCCTGCAAATACACTACCCTGCTCTGCTGTTTCAAGTCCTCTGTCTATTTCATCACATACTGGTGCACAGTCAGGGAGTGGCTCAAGTAGCACTGATGAATTTTTGGCCGCCAAAACAACTGGAGTTCCTACCACTCCTGTTAGCAATGTCGAGCCTCCAAAAATAGTCAATGCAACCACTATGTTGACGTCAGCTGTGCCTCAGGCTCGTAAAGCATCCTTGGCTCGATTTTTAGAAAAGCGCAAGGAAAGGGTGATGAATGCAGCACCATATAACCTCAACAAGAAGTCTGAAGAGTGTACCACTGCAGAATACAATGGTGCTAACTTCTCTGCAAGTACTGCTACTAATACTATCTCAGTCAAGCAAGGATAG 1149 0.4517 MERDFMGLSSKEPLAVVKEEMNDDGCNDSGFTKGSVAQWPFSNKVSALPNLMSFKVSQDDKTKNMVSDPITSTGFLTILSQDAFDSSQKRSAGEPLKSFNHDGQGGFHFSLAPYPAQHDMKYVTCPHDDVKTFSVSSGKPFLKNHFATAAQNMNGTNVKQPLLGGIPVATPHSVLSTIGAVAGMTESCNSVKPSAPFPQLTIFYAGAVNVFDDISAEKAQAIMLLAGNGLSAASNMAQPKVPAPGLKLAAGDGVSVSPPANTLPCSAVSSPLSISSHTGAQSGSGSSSTDEFLAAKTTGVPTTPVSNVEPPKIVNATTMLTSAVPQARKASLARFLEKRKERVMNAAPYNLNKKSEECTTAEYNGANFSASTATNTISVKQG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00091 382 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 139 359 IPR040390 -
Gabi4436g00091 382 Pfam tify domain 199 227 IPR010399 -
Gabi4436g00091 382 Pfam Jas motif 325 349 IPR018467 -
Gabi4436g00091 382 ProSiteProfiles Tify domain profile. 193 228 IPR010399 -
Gabi4436g00091 382 SMART tify_2 193 228 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00091 Gabi-Chr4436 780128 783919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00091 39 355 Tify Gene Family AT3G17860 35.077 3.35e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi4436g00091 tify 1.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00091 K13464 - gmx:100807043 532.717