Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00068 ATGAGAACCCAACGGCCTCACCATCTTCTCCTATCCCTCTTCTTCTTGGCAGCCGCATTCTCAACGGCCACTGCCGGAGAATACGGAGGTTCTACCGGCGGTGACGGCGACACTGATTTCATCCGCACCAGTTGCAACACCACGCTCTACCCGGACGTGTGCTACACTTCCCTCTCTCGGTACGCCAATGCAGTCCAACAGAACCCTGGCCAGTTGGCTCGTGTCGCCATATCCGTGAGCCTCTCCAAGGTTCACCGCACGGCCTCCTACGTTTCCAACCTCACTCGCGAGGCCGACTACGGCGGAAACTCGCGCGCCGCCCTGGCTCTCCATGACTGCTTCTCGAATCTGGACGACGCCGTCGACGAAATCCGCGGCTCACTGAAGCAGATGCGGCAGATAGGAGCCGCCGGAACAGGCGCCGGATCGTTCCTGTTCCAGATGAGCAACGTGCAGACGTGGATGAGCGCGGCGCTCACCGACGAGGAGACGTGTACGGACGGATTCCAGGATGTACCGGACGGTTCGGTGAAAACGGATGTATGCGATCGAGTCTCGAACGTGAAGAAGTTCACAAGCAATGCTTTGGCGCTCGTGAATCGCTACGCCAACAAGGGAATGCCTTGA 627 0.5901 MRTQRPHHLLLSLFFLAAAFSTATAGEYGGSTGGDGDTDFIRTSCNTTLYPDVCYTSLSRYANAVQQNPGQLARVAISVSLSKVHRTASYVSNLTREADYGGNSRAALALHDCFSNLDDAVDEIRGSLKQMRQIGAAGTGAGSFLFQMSNVQTWMSAALTDEETCTDGFQDVPDGSVKTDVCDRVSNVKKFTSNALALVNRYANKGMP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00068 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 202 IPR035513 -
Gabi4436g00068 208 NCBIfam pectinesterase inhibitor domain 8 202 IPR006501 GO:0004857
Gabi4436g00068 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 198 - -
Gabi4436g00068 208 Pfam Plant invertase/pectin methylesterase inhibitor 39 198 IPR006501 GO:0004857
Gabi4436g00068 208 CDD PMEI-like_3 43 204 - -
Gabi4436g00068 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 202 IPR035513 -
Gabi4436g00068 208 FunFam Pectin methylesterase inhibitor 1 36 202 - -
Gabi4436g00068 208 SMART PMEI_2 36 198 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00068 Gabi-Chr4436 603344 604252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00068 38 198 Carbohydrate Esterase AT5G53370 27.607 2.24e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00068 - - gmx:100812251 327.02