Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00062 ATGGCTGCGAAACGGTTTTTGGATGATTCTGATCAAGACAAAGATAAGCCAAGCGACAAACGGATGAGAACACCAAGAACTTCTTTTGCTTCGGTAATAGGAGAGGTGGTTATGGTGAAAAACTTGCAGAACCTTTTCTCTGGCTTGGAACCTTTGCTTAGAAGAGTGGTGAATGAAGAGGTGGATAGAGTCATGAGACATTGTTGTCCACGCTCAATAACAAGGTCCCCTTCTTTGAGAATCCAAGCATTAGAGCAACCATCAAGCTTTCAACTCATGTTCAACAAAAAGCTTTCACTTCCTATATTCACGGGTAGCAGGATACTAGACATAGATAACAATCCAATCCATGTGGTTCTTGTTGACAAAAGTGTTGATCAAATTGTTCCAACAAGTCTTCCACATCCCATAAAGCTAGAAATTGTGGTTCTTGATGGGGATTTTCCTGCTGGTGATAAAGAGTCATGGACGAGTGAGGAATTCAACAACCACATAGTGAAGGAGAGAACGGGGAAGAGGCCATTGCTCACAGGAGAATTGAATCTGACCATGAGGGATGGAATTGCACCAATTGAGGAGATAGAATTCACAGATAATTCTAGCTGGATACGTAGCAGGAAGTTCAGAGTTGCTGTTAGGGTGGCTCCGGGGAGTAATCCAAGTGTTCGAATTTGTGAAGGCATGACTGAACCATTTGTCGTCAAGGATCACCGTGGTGAATTGTACAAGAAACATCACCCACCAATGCTCCAAGATGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAAAAAATTGTCCTCAGAAGGGATTACCACAGTGCAAGACTTTCTCAAGTTATCCGTTGTTGATACTCATAGGCTCAGAAAGATTTTAGGCATTGGGATGTCAGACAAAATGTGGGATGTGACAATGAAGCATGCAAGGACTTGCAACATGGGCAACAAGCTCTACATCTATCGTGGGCCTCATTTTACTATCTTTCTGAACGCCATATGCCAGTTGGTCAGAGCTGATATCAACGGCCAAAACTTTGCCGGCAGAGAGCTTACCAATATGAACAGGAGCTATATAGAGAAACTGGTGAGAGAAGCATATGCTAGATGGAATAACTTGGAGGAAATTGATGAGGTTTTGAAAGATAACGTTGCTTTGTTAACCCAAGGTGAAACTGTGGAACAATTATTAAATAATCATCAAGGATCGGTAACAGCATATGATGAGAACGAATATTATGATGATAAATCTAGAGAGGGTGGCATCTATAATGCACAAATGGGGTGCAGCGAGTGGCCAGTGAATGCAACATTTGCCACATCATCATTCGTGAATGGCATCCCTTACAGCTTCTCAGAGTCACAATCGGACGGTGATATAACGCCCCCAGGTTCGGGTTCCGTCATTGATGGTGGTGGTGCCCCAAGGTGGCATTAG 1446 0.4336 MAAKRFLDDSDQDKDKPSDKRMRTPRTSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVDRVMRHCCPRSITRSPSLRIQALEQPSSFQLMFNKKLSLPIFTGSRILDIDNNPIHVVLVDKSVDQIVPTSLPHPIKLEIVVLDGDFPAGDKESWTSEEFNNHIVKERTGKRPLLTGELNLTMRDGIAPIEEIEFTDNSSWIRSRKFRVAVRVAPGSNPSVRICEGMTEPFVVKDHRGELYKKHHPPMLQDEVWRLEKIGKDGAFHKKLSSEGITTVQDFLKLSVVDTHRLRKILGIGMSDKMWDVTMKHARTCNMGNKLYIYRGPHFTIFLNAICQLVRADINGQNFAGRELTNMNRSYIEKLVREAYARWNNLEEIDEVLKDNVALLTQGETVEQLLNNHQGSVTAYDENEYYDDKSREGGIYNAQMGCSEWPVNATFATSSFVNGIPYSFSESQSDGDITPPGSGSVIDGGGAPRWH 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00062 481 Pfam Calmodulin binding protein-like N-terminal domain 90 237 IPR046831 -
Gabi4436g00062 481 Pfam Calmodulin binding protein C-terminal domain 320 379 IPR046829 -
Gabi4436g00062 481 PANTHER OS02G0177800 PROTEIN 1 428 IPR012416 GO:0005516
Gabi4436g00062 481 MobiDBLite consensus disorder prediction 1 23 - -
Gabi4436g00062 481 MobiDBLite consensus disorder prediction 1 25 - -
Gabi4436g00062 481 MobiDBLite consensus disorder prediction 456 481 - -
Gabi4436g00062 481 Pfam Calmodulin binding protein central domain 249 315 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00062 Gabi-Chr4436 523544 527607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00062 3 380 Calmodulin-binding Proteins AT5G57580 49.869 6.37e-120 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00062 - - gmx:100802257 718.383