Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00048 ATGTACACATCAAGGAAGAAGATCCACAAAGATAAGGATGCTGAACCAACTGAGTTTGAAGAGTCAGTTGGGCAGGCATTGTTTGATCTGGAAAATACTAACCAGGAGCTTAAAAGTGATCTGAAGGATCTATACATAAATTCAGCAGTACAAATTGATGTTTCTGGGAACCGCAAGGCTGTTGTTATCCATGTCCCCTACAGATTAAGGAAAGGTTTCCGGAAGATTCATGTTAGGCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTAATTTTGATTGCCACTCGGAGGATATTGAGGCCACCAAAGAAAGGGTCTGCTGTCCAGCGTCCCCGTACCCGCACCCTTACTGCTGTTCATGAAGCAATGTTGGAGGATGTTGTATTGCCTGCTGAAATTGTTGGGAAGCGTGTGAGGTATCGAATTGATGGATCCAAGATTATGAAGGTTTTCTTGGACCCAAAGGAGCGAAACAACACTGAGTACAAGTTGGAGACTTTTGCCGCAGTGTACAGGAAGCTGTCGGGCAAAGATGTTGTGTTTGAGTATCCTAACACCGAGGCCTAG 576 0.4479 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRTRTLTAVHEAMLEDVVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPNTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00048 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gabi4436g00048 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gabi4436g00048 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gabi4436g00048 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00048 Gabi-Chr4436 439886 442011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00048 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 80.628 1.66e-114 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00048 K02993 - gmx:100499757 369.392