Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00030 ATGTCTTCTGTAGCAATAGCAATCTATTTTTTCCTTCTTTTCACTTTCATATACACAGTATTCTTGCATACAAAACAACGAAATGTTGGTCATAAAAAGCCACCGGGTCCGCCAGCACTGCCAATTATCGGGAACCTCCACATGTTGGGTACCCTTCCACATCGCACCCTTCAGTCCCTATCCAAAAAGTATGGTCCCATCATGTCCTTGCAACTGGGAAATGTCCCGGCCATCGTGGTTTCCTCCTCTGAGGCTGCTGAGTTTTTCCTCAAGACCCACGACACCGTTTTTGCAAGCAGGCCAAAGATTCAAGCTTCTGAGGTCTTATCATACGGCTCCAAGGGCTTCGCGTTTTCTGAATATGGTCCATACTGGCGCAGCATGAGGAAATTTTGCACTCTGCAACTTCTTGCCACATCAAAAGTTGAACTCTTTGCTCCTATTCGGAGGGAGGAGCTATGTCTAGTTGTCAAGTCATTGGAGAAAGATGCGGCAGTGGGTCAGGTTGTGAACCTTAGCGAGGTTGTAGAGAACCTTGTAGAGGATATAGTGTATAAGATGATACTGGGTCGCGGTAGTAAATATGATCAATTTGACTTGAAGAGGTTTGTTCAAAAAGCAACGACATTGCTCGGAGCTTTTAATATTGCGGATTATGTACCTTGGCTTGGCGTATTCGATATTCAGGGAATAACACGGGACCTCAAGGAAACCAGTAAAGCAATTGATGAGGTGCTGGAGAAGGTAATGGAAGAGCATGAACAAGCTGCTAATTATGTAGACAAAAGGAATCGTAAAGACTTCGTTGAAATACTACTCTCAAAGATGCACCAAACCATAGATCACCAGGGCGAACAGAGCCACGACGTCATTGATCGAACTAACATCAAGGCTATTCTAGTAGATATGCTTGTGGGGTCAATTGACACCTCTGCTACCGTGATTGAATGGGCTCTATCAGAACTTTTGAGGCATCCAAGGGTGATGAAGGTCCTTCAAGATGAGATAGAGCATAAAGTTGGAATTGGGAAAATGGTGGAAGAGAAGGATTTGATGACGTTGAGTTACTTGGATATGGTGGTGAATGAGACCTTAAGACTGTATCCTGTTGCACCATTACTGGTCCCTCGGGAATCCAGAGAGAGCATTACAATTGGTGATTATCATATAAAGAAAAAATCACGAGTCATAATAAATGCGTGGACCATAGGGAGGGATCCGAAGGTGTGGTCAGATAATGCTGAAACATTTTATCCGGAGAGATTTATGAAAAAGAAAGTAGAACATCAAGGACAAAACTTTCAATTTGTACCATTTGGTTCTGGTCGTAGAGGTTGCCCTGGGATGCAACTTGGTTTGATTACCGTTAAACTGGTCATGGCTCAATTGGTGCATTGCTTTAATTGGGAACTTCCATGTAATGTTACTCCTGACAACTTAAATATGCAGGAGAAATTTGGGCTCGCAATACCAAGAGCTCAGCAGTTGCAGGCAATACCTTCTCATCGTTGA 1512 0.4339 MSSVAIAIYFFLLFTFIYTVFLHTKQRNVGHKKPPGPPALPIIGNLHMLGTLPHRTLQSLSKKYGPIMSLQLGNVPAIVVSSSEAAEFFLKTHDTVFASRPKIQASEVLSYGSKGFAFSEYGPYWRSMRKFCTLQLLATSKVELFAPIRREELCLVVKSLEKDAAVGQVVNLSEVVENLVEDIVYKMILGRGSKYDQFDLKRFVQKATTLLGAFNIADYVPWLGVFDIQGITRDLKETSKAIDEVLEKVMEEHEQAANYVDKRNRKDFVEILLSKMHQTIDHQGEQSHDVIDRTNIKAILVDMLVGSIDTSATVIEWALSELLRHPRVMKVLQDEIEHKVGIGKMVEEKDLMTLSYLDMVVNETLRLYPVAPLLVPRESRESITIGDYHIKKKSRVIINAWTIGRDPKVWSDNAETFYPERFMKKKVEHQGQNFQFVPFGSGRRGCPGMQLGLITVKLVMAQLVHCFNWELPCNVTPDNLNMQEKFGLAIPRAQQLQAIPSHR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00030 503 CDD CYP71-like 63 496 - -
Gabi4436g00030 503 Coils Coil 228 248 - -
Gabi4436g00030 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gabi4436g00030 503 FunFam Cytochrome P450 83B1 21 499 - -
Gabi4436g00030 503 Pfam Cytochrome P450 34 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 Gene3D Cytochrome P450 23 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4436g00030 503 PANTHER CYTOCHROME P450 93A3-LIKE 8 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00030 Gabi-Chr4436 230350 232847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00030 34 501 Cytochrome P450 AT3G48310 42.463 1.18e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00030 - - psat:127113357 711.835