Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4436g00002 ATGCATTTCACTGACAACACTGAGAATCAACATACAGTGAACTTTGCCACCCCGAGAGGGTTTCTTACCAAACTCAAATCAGGAGTCAAAGAAACTTTCTTCCCTGACGATCCCTTTAGGCATTTGAAGAATGAAGAAAAGCCACTGCGCAAAGCCCTTAAAGGGGTTCAGTATTTCCTCCCAATCTTCGAATGGCTCCCCAGTTACACTTTGCGCTTGTTTTACTCTGACTTCCTCGCTGGCCTCACCATGACCAGCTTTGCTGTCCCTCAAAGCATTAGCTTTGCTAAACTCGCTGACCTTCCTCCCATCATTGGCCTCTATAGCAGTTTTGTGCCACCTTTAGTGTATGCTATTTTTGGGAGCTCAAGGCACATGTCTGTGGGTACGTTAGCTTCATTATCATTGCTTATATATCAAAATATTTCAACCGTGGCAAGACCAGAAGACGACCCTAAGCTCTACCTTCATTTGGTTTTCACAACTACCTTTGTTGCCGGCGCCTTCCAGACTTGTTTGGGAATTCTCAGGTTGGGGATGTTGGTGGATTTCTTGTCACATGCTACCATCACTGGCTTCATTGGAGGGACAGCAATAATTCTCTGCGTCCAACAACTGAAGGGAATTTTCGGCATGCAACATTTTGTGAATAAAATGGACCTCGTAACACTGGTGAAGGGTATATGGACCTATAGAAATGAGATAAGGTGGGAGACCACAGTTCTGGGTGTGATCTTCCTTGTTTTCCTGCAGTTTACTAGATACGTGAGGAATAGGAACCCAAAACTCTTTTGGGTATCAGCTATAGCTCCAATGGCAACTGTAATGGTTGCTGGTGTTTTTACTTACCTCGTCAACGGCCAACGACATGGAATTCAAATTGTGGGCTACCTAGATAAAGGAATAAATCCTTCGTCCATCCAGTATCTTAACTTTGACAGTAAATATTTACCTGCGATACTGAAAACTGGTCTTTTGACAGGTTTTGTGTCATTGGCGGAAGGAATAGCAATTGGAAGAAGCTTTTCTGTGGTTGAAAATACGCCTCATGATGGGAACAATGAGATGATAGCTTTTGGTCTTATGAACTTATGCGGTTCTTTTACTTCATGTTACTTGACTAGTGGACCATTTTCCAAAACAGCTGTGAATTACAGTGCAGGGTGTAAGACAGCTATGTCAAACATAGTACAGGGTTTCCTAATGGCACTCACACTACAGTTTTTGGCACCATTTTTTGGTTACACCCCTCTTGTTGCTCTATCAGCTATTATAGTCTCTTCCATGATGGGGTTGATTAGTTATAGCGAATATATTAATCTCTATAAAGTTGACAAGTTTGATTTTGTTATTTGCATGGTGGCCTTTCTTGGAGTAACCTTTATAGCCCCGGATGTTGGCCTCATGTTGTCAGTTGGTCTTAGTGTGCTCAGGGCACTCTTGTATGTGGCTAGGCCTGCGGCATGTAGGCTTGGAAAGTTACCTGACTTGGATTTATATCGAGATGTTGAGCAGTATAATGCTTCAACATTCCCAGGAATTCTGATTGTACAACTTGGTTCTCCCATTTACTTTGCAAATTCTACCTACATCAAAGAAAGAATTATGAGGTATATTAGAAGTGAACAAGACTCAAATGGATATATCGTTGAGCAGATCATACTCGATTTGTCAGGAGTGACATCCATTGACATCACTGCTATTGAAGGACTGTGGGAAACAAATAAAGTTTTTGAAAAGAATAGAATGAAGATGTCATTAGTAAACCCAAGGAAGGAGGTTTTGGAGAAACTGATAGCATCCAAGTTTGTTGAAAGGATTGGGAAGGACTCATTTTTTCTAACATTGAACGATGCAGTAAAGGCAAGTCAGTACTCACTTGCAATTCGAGAAATAAATGTTGTGTAA 1908 0.414 MHFTDNTENQHTVNFATPRGFLTKLKSGVKETFFPDDPFRHLKNEEKPLRKALKGVQYFLPIFEWLPSYTLRLFYSDFLAGLTMTSFAVPQSISFAKLADLPPIIGLYSSFVPPLVYAIFGSSRHMSVGTLASLSLLIYQNISTVARPEDDPKLYLHLVFTTTFVAGAFQTCLGILRLGMLVDFLSHATITGFIGGTAIILCVQQLKGIFGMQHFVNKMDLVTLVKGIWTYRNEIRWETTVLGVIFLVFLQFTRYVRNRNPKLFWVSAIAPMATVMVAGVFTYLVNGQRHGIQIVGYLDKGINPSSIQYLNFDSKYLPAILKTGLLTGFVSLAEGIAIGRSFSVVENTPHDGNNEMIAFGLMNLCGSFTSCYLTSGPFSKTAVNYSAGCKTAMSNIVQGFLMALTLQFLAPFFGYTPLVALSAIIVSSMMGLISYSEYINLYKVDKFDFVICMVAFLGVTFIAPDVGLMLSVGLSVLRALLYVARPAACRLGKLPDLDLYRDVEQYNASTFPGILIVQLGSPIYFANSTYIKERIMRYIRSEQDSNGYIVEQIILDLSGVTSIDITAIEGLWETNKVFEKNRMKMSLVNPRKEVLEKLIASKFVERIGKDSFFLTLNDAVKASQYSLAIREINVV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4436g00002 635 ProSiteProfiles STAS domain profile. 504 623 IPR002645 -
Gabi4436g00002 635 PANTHER SULFATE TRANSPORTER 23 623 IPR001902 GO:0016020|GO:0055085
Gabi4436g00002 635 ProSitePatterns SLC26A transporters signature. 103 124 IPR018045 GO:0008271|GO:0008272
Gabi4436g00002 635 NCBIfam sulfate permease 61 619 IPR001902 GO:0016020|GO:0055085
Gabi4436g00002 635 Gene3D STAS domain 485 626 IPR036513 -
Gabi4436g00002 635 Pfam Sulfate permease family 74 455 IPR011547 GO:0016020
Gabi4436g00002 635 Pfam STAS domain 506 619 IPR002645 -
Gabi4436g00002 635 CDD STAS_SulP_like_sulfate_transporter 506 616 - -
Gabi4436g00002 635 SUPERFAMILY SpoIIaa-like 505 622 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4436g00002 Gabi-Chr4436 20738 25811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4436g00002 13 634 Inorganic Solute Cotransporters AT5G19600 58.587 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4436g00002 K17471 - gmx:100789107 861.677