Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4435g00010 ATGACCTCGCATGGGTATTTCTCTGTTGTCTTTGTGTTTGCATGTCTTGCAACCACAGCATTCTCACAACTGTCACCTAATTACTATGACTACTCGTGCCCTAAGGCTTTGAGCACCATCAGAAGTGTCGTGGATGCTGCCGTACAGAAAGAGCGCCGTATGGGCGCGTCTTTACTACGCTTGCATTTCCATGACTGCTTTGTTAACGGTTGTGATGGTTCAATTCTTCTAGACCCCACATCTACCATTGATAGCGAAAAGAATGCAAACCCTAATTTCCAATCAGCTAGAGGATTTGAAGTGGTGGATGAGATCAAGCAAGCAGTGGACGAAGCATGTGGAAAACCGGTTGTTTCTTGCGCAGACATATTGGCTGTTACAGCTCGAGACTCTGTTGTTGCGTTAGGGGGGCCAACATGGGATGTGCAATTGGGGAGAAGAGACTCAACCACAGCAAGCCGTGATGCTGCAAATGCTGAAATTCCAGCACCATTTTTCAACCTTTCTCAACTCATCAGCAACTTCCAAAACCATGGTCTAGATGAGAAGGACCTTGTTGTTCTTGCTGGAGGACACACCATTGGATTTGCACGTTGTGTTTCATTTAGGGACCATATCTACAATGACTCTGACATCAATCCCTACTATGCACAACAGCTTAAATATATTTGCCCAAAAAATGGAGGTGACTCCAACCTTTCTCCTTTGGACCCAACACCTGCGCGATTTGATGTAGCATACTACTCTGATTTAGTTCAAAAGAAAGGTCTTCTTCACTCTGATCAGGAACTGTACAATGGTGGTTCTACTGATGCATTGGTTAAACAATATAGCTACGATACTACATCTTTCTACAAGGACTTCGCGAACTCCATGATTAAGATGGGAAACATTCAGCCCCTCACTGGGAATCAAGGTGAAATTCGTGTCAACTGCAGGAAACTGAACTAA 951 0.4437 MTSHGYFSVVFVFACLATTAFSQLSPNYYDYSCPKALSTIRSVVDAAVQKERRMGASLLRLHFHDCFVNGCDGSILLDPTSTIDSEKNANPNFQSARGFEVVDEIKQAVDEACGKPVVSCADILAVTARDSVVALGGPTWDVQLGRRDSTTASRDAANAEIPAPFFNLSQLISNFQNHGLDEKDLVVLAGGHTIGFARCVSFRDHIYNDSDINPYYAQQLKYICPKNGGDSNLSPLDPTPARFDVAYYSDLVQKKGLLHSDQELYNGGSTDALVKQYSYDTTSFYKDFANSMIKMGNIQPLTGNQGEIRVNCRKLN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4435g00010 316 CDD secretory_peroxidase 23 314 IPR033905 GO:0004601|GO:0042744
Gabi4435g00010 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 ProSiteProfiles Plant heme peroxidase family profile. 23 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Gabi4435g00010 316 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Gabi4435g00010 316 Gene3D Peroxidase, domain 2 162 295 - -
Gabi4435g00010 316 Gene3D - 27 313 - -
Gabi4435g00010 316 Pfam Peroxidase 41 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 FunFam Peroxidase 162 295 - -
Gabi4435g00010 316 PANTHER PEROXIDASE 72-RELATED 22 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4435g00010 316 FunFam Peroxidase 27 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4435g00010 Gabi-Chr4435 66579 68491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4435g00010 22 316 Peroxidase AT5G05340 58.054 3.23e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4435g00010 K00430 - gmx:100802035 540.806