Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4429g00002 ATGGAAAATCAATCTCCAAATGGCAAAAAGGCAATGGAAGAAGAGCTAATGAGAGGGCGTGACATGGCAAGGGAGTTACTTGAAGTACTTGCAAACGAGGAAGGGTCAAAGTCAGTTTTACCAATTGCTGAGGATCTTGTTCTCAATGTAATGAGATCATTCACAAATACCCTTTTGCTCTTGAACACCAACCATGATGACTCCAATGAGGTGGTGGCGCCTATAACTATTGGAGATTTCACTTTCTCCGCTAACAACTGCCCAAAGCTGAAGGATGTCGATGAAACTTGCAAGAGTATCAAAACTCACGACACCAAAAATCGAAGAGGGTGCTATAAGAGAAAATCAATTGCGCCAACTTGGGAGGAGGACACCTCAATTCTGATTGAAGATGGCCATGGGTGGAGAAAGTATGGACAAAAAATGACAATGAATGCCAAATACCTCAGGAGCTACTACAGGTGTACTCACAAATATGATGAGGGTTGCGAAGCAATCAAACATGTTCAGAGAATTCAAAAAGACCCTCCATTGTACCGGACAACCTATTATGGCTATCACACTTGCAAAAGCCCTTTGAATCCCGAGATAATTTTGGAACCTGTTTCTTCCTTTGGCTCTTCTATATTACTTAGCTTTAATAACAGCCTTCCAAGCAAACAAGAACACCCGTTTTCATCACCATTTTTTGCATCAAAGAAACAGAAGCCAACGGAAGTGGTTCACTATGACCATATTGCTCAAAACCAATTGTCGTCCTTAGAAGACCTCCTATTATGCGATTATGAAAATTATTTCGATTATTCGAGTCATGTCACTATGCTATCATCGACCAAATCCGTTGATTTTGACAATTTTTATGAGCAGTTTGATTTTGATGGTTAG 885 0.4034 MENQSPNGKKAMEEELMRGRDMARELLEVLANEEGSKSVLPIAEDLVLNVMRSFTNTLLLLNTNHDDSNEVVAPITIGDFTFSANNCPKLKDVDETCKSIKTHDTKNRRGCYKRKSIAPTWEEDTSILIEDGHGWRKYGQKMTMNAKYLRSYYRCTHKYDEGCEAIKHVQRIQKDPPLYRTTYYGYHTCKSPLNPEIILEPVSSFGSSILLSFNNSLPSKQEHPFSSPFFASKKQKPTEVVHYDHIAQNQLSSLEDLLLCDYENYFDYSSHVTMLSSTKSVDFDNFYEQFDFDG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4429g00002 294 ProSiteProfiles WRKY domain profile. 124 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00002 294 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00002 294 Pfam WRKY DNA -binding domain 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00002 294 Gene3D WRKY domain 116 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00002 294 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 215 IPR044810 GO:0003700
Gabi4429g00002 294 SUPERFAMILY WRKY DNA-binding domain 125 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4429g00002 Gabi-Chr4429 35120 38436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4429g00002 15 191 WRKY Transcription Factor Family AT3G56400 38.418 3.98e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4429g00002 WRKY 1.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4429g00002 - - gmx:100792193 381.333