Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4429g00001 ATGGAGAATCAGCTTTCAAATGGAAGAAAGGCAATGGAACAGGAGCTACTCAGAGGGCGTGATATAGCAAATCAGTTACTTGAAGTACTTGTTCATAAATCGAATGCTCACCATGGAGATGTAAGAGGGTCAACGTTACCATTTGCTGAAGATCTTGTGCGCAAGGTACTGAGATCATTCACAAACACACTTTTCATCTTGAACACCAATAATGATGTCTCCAATGAGGTGGTTGTTCCTATCACTGTCAGAGATTTCTCTTCTTCCGCTAATTTCCAAAAGCCTGAGGATACAGATGAGACTCGCGAGAGTTTCTTCAACCCTAAAAGTAGAAGAGGGTGCTACAAGAGAAAGTCAACTGCACCAATTTGGGAGAGGGACAGCTCAAAGCTTATCGAAGATGGCTATGCATGGAGAAAGTATGGACAAAAAATGACAATGAATGCCAAATACCTTAGGAGCTACTATAGATGCACTTATAAGAATGATCAGGGCTGTCCAGCAATCAAACAGGTGCAGAGAATTCAAGAGGACCCTTCATTGTATCGGACAACATATTATGGCCACCACATATGCAAAAGCTCTTTAAATTCAGAGATAATTTTGGAACCTACTTCCTCTGGTTCTTCTATATTCCTTAGCTTCAATAACAGCCTCCCAAACAAGGAAGAATACCCTTTTTCATCATCACTTTTTGCATCCACAAAACATGAGCCTATGGAAGTGATTCCCAATGACCATATTGCTCACAACCATTTGTCCTCATCAGATTACCTCATGTCATGTGACTATGAACTTGATTTGAGTTACTCGAGTCATGTTACTATGCTACCACAAACCGAATCTGTTCAATTTGATCAAAACGTTTATGGGTGCAGTTTGGATTTTGAATTTTGA 897 0.4013 MENQLSNGRKAMEQELLRGRDIANQLLEVLVHKSNAHHGDVRGSTLPFAEDLVRKVLRSFTNTLFILNTNNDVSNEVVVPITVRDFSSSANFQKPEDTDETRESFFNPKSRRGCYKRKSTAPIWERDSSKLIEDGYAWRKYGQKMTMNAKYLRSYYRCTYKNDQGCPAIKQVQRIQEDPSLYRTTYYGHHICKSSLNSEIILEPTSSGSSIFLSFNNSLPNKEEYPFSSSLFASTKHEPMEVIPNDHIAHNHLSSSDYLMSCDYELDLSYSSHVTMLPQTESVQFDQNVYGCSLDFEF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4429g00001 298 Gene3D WRKY domain 117 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00001 298 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00001 298 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00001 298 SUPERFAMILY WRKY DNA-binding domain 127 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00001 298 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4429g00001 298 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 217 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4429g00001 Gabi-Chr4429 22121 26296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4429g00001 1 194 WRKY Transcription Factor Family AT3G56400 37.436 1.99e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4429g00001 WRKY 4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4429g00001 - - gmx:102663141 380.178