Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4426g00003 ATGGAAAGTTCCAAGAACAATAGAGTGGAGAAGAGAGGGTATGAGCTAGTTGAGGAGGATGATGGTGCACAGCACCATCTGACTCAGTCAAAGAAGCCAAAACTACCCGGTTTAGCCAGTGTAATTGTGGAAGCTTTAAAGGTGGATAGTCTGCAGAGACTTTGCTCATCTTTGGAACCCCTTCTCAGGAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGACAAAATTGGGTCCTGCTAAACTGGCTGAAAGATCTACACCACCAAGAATAGAAGGACCAGGGTCAAAGAATCTGCAGCTTCATTTCAGAACAAGAATGCCACCTCACTTGTTCACTGGAGGGAAGGTTGAGGGAGAGCATGGAGCATCTATTCATGTTGTCTTGTTGGATCCGAACACAGGAAATGTTGTTCAAGTTGGACCAGAATCAGTTGCTAAATTGAATGTTGTGGTGCTTGAAGGTGACTTTAATGAGGAAGCTGATGATGATTGGACAAAAGAGCACTTTGAAATCCATGAAGTAAAGGAAAGAGAGGGGAAAAGGCCACTTCTAACTGGAGATTTGCAGGTTAGCCTAAAGGAAGGGGTAGGAACCTTAGGGGATCTTACTTTCACTGACAATTCTAGTTGGATAAGAAGCAGAAAATTCAGGCTTGGTATTAAGGTGGCTCCTGGGTATTGTGAGGGGATTCATGTTCGTGAGGGAAAGACTGAAGCCTTTGCTGTTAAAGATCATAGAGGAGAATTATATAAGAAACACTATCCACCTGCTTTGCATGATGAAGTTTGGAGATTGGATCGGATAGCAAAAGATGGGGCACTTCACAAAAAATTGATTCAAGCAAAAATAGTAACTGTAGAAGATTTCCTGCGTCTTCTTGTTCGCGAACCACAGAAGTTAAGAAGTATACTTGGTAGTGGAATGTCCAACAGGATGTGGGAGAACACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTCTTTGTTTACTTCACTAATGAAACCAATAACACTGGCATTGTGTTCAACAACATATACGAGCTGAGAGGCCTTGTTGCTGATGGGCAATTCTTCTCTTTGGAATCACTTACTCCAAATCAAAAGATGTCTGTGGATTCCTTGGTGAAGAAAGCATATGAAAATTGGAACCAAGTTATAGAATATGATGGCAAAGTTTTAAATTCTATTACTAATTCCAAAAAGGGGTCAAGATCTGTAGCCACTCATATAATGCATCACAATGATTTCCCAGAGCAGCAATATACTTCTACAAATCAGCATTTTCAAATAGCAAATAACTACTCATCTAGTCCTGATTTGACTGATTACCCATTTGGTAGATCTGATAATCAGATAGTAGGGACATCATTAAATAACTCTCAAGTAGCATTGCAGAGAAGTGGACAAGGATTGGAAGACATTGTGGCAGAAGAACTCCGTCTTAGGAGTTCAGAGATGTTGGAGAGTGATGATATGCAGAGGTTGCTTAAGACAATTAATGTAGGAGGAGCCAATATGTCAGCTAATTTTGATCATTCTAATGAGGGTTGTTACACTTACAGCCTTCAGTATGAGCCTCAAATGTATCATTCATTCAGTGAGGATCATGGTAAGTCTTCAGGCAAAGCTGTTGTCGGGTGGCTTAAGCTCAAAGCTGCTTTAAGATGGGGCATATTTATCAGAAAAAGAGCTGCAGAAAGGAGAGCACAGCTTACTGAGTTGAATTGA 1737 0.4116 MESSKNNRVEKRGYELVEEDDGAQHHLTQSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALTKLGPAKLAERSTPPRIEGPGSKNLQLHFRTRMPPHLFTGGKVEGEHGASIHVVLLDPNTGNVVQVGPESVAKLNVVVLEGDFNEEADDDWTKEHFEIHEVKEREGKRPLLTGDLQVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGIKVAPGYCEGIHVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKIVTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYFTNETNNTGIVFNNIYELRGLVADGQFFSLESLTPNQKMSVDSLVKKAYENWNQVIEYDGKVLNSITNSKKGSRSVATHIMHHNDFPEQQYTSTNQHFQIANNYSSSPDLTDYPFGRSDNQIVGTSLNNSQVALQRSGQGLEDIVAEELRLRSSEMLESDDMQRLLKTINVGGANMSANFDHSNEGCYTYSLQYEPQMYHSFSEDHGKSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLTELN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4426g00003 578 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Gabi4426g00003 578 MobiDBLite consensus disorder prediction 1 28 - -
Gabi4426g00003 578 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
Gabi4426g00003 578 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Gabi4426g00003 578 PANTHER OS02G0177800 PROTEIN 10 495 IPR012416 GO:0005516
Gabi4426g00003 578 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4426g00003 Gabi-Chr4426 42112 47080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4426g00003 1 578 Calmodulin-binding Proteins AT2G24300 62.459 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4426g00003 - - gmx:100775528 1010.36