Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4420g00053 ATGGCCATGCATGTTCATAGCTGTTTCTGCTTCTTCTTCACCATCGCCGTCATAACCATCTTCTCCGCAAAGCCGTCGTTGTCACAGCCGCAAGCCGCCGATTCTTGCAACGGAATACTCCTGTCGTATGTTCACACCGGCGGCGCGAAGCTTCCGCCGAACGTTTCCGACACGGCGCAGCAACCGTACCGGTTCGAGTCCACGCTCACGGTGCTCAACAACGGGCTCGAGGAGCTTCAGGCTTGGAGGGTGTTCGTGGGGTTTCAGCACCATGAGTGGTTGGTCTCTGCTTCCAATGCAGTGCTCGCCGACGGCACGAGCCTCCCCGGCTCCGTCGGGAACGGCACCGTTTTTGCTGGGTCCGGCGTGACCGATCTTAAGACGGCGGCGGCGACTGCTGGGGACTTGACCCAGATGCAGGTTCGGGTCGAATTGGTGGGGACCCAGCTTGGGGTGGCGCCACCCAGCGTCCCCATGCCTTCTAGCATAAACCTGGCTAATGATGGATTCGTTTGTGGTAAACCCATTGGTCAAGGGAACAATGAGACTCATGTCTGTTGCACAAGTGATCCCAATTTCAAAACAAACATAGCTACAGATGAAGAGTTTCTACCTAGACAGAATGGTGATCTTAGCATCATGTATGATGTGATCAAAGCATACGATTCCAATTACTGGGCTGAGGTTACAATTGCAAACCATAACCCCCTTGGCCGTCTTGACAACTGGAGATTAAGCTGGGACTGGAACAATGATGAGTTTATATTCACAATGAAAGGGGCATATCCATCTATTGTTGATTCTTCTGAGTGTGTCTTTGGTCCACAAGGTGTATTCTACAAGGAAATTGACTTTGCCAATGTATTGAATTGTGAAAAAAGACCAACCATAATTGATCTCCCTCCTACAAGGTTCAATGATTCAGACCTTGGCAAAATTCCATTTTGCTGTCGGAATGGTACTATATTGCCACCATCAATGGATCCTAGCATGTCAGCTTCAAGGTTCCAAATGCAGGTGTACAAAATGCCACCAAACATTAACCGCTCCCAGCTTTCACCACCACAAAACTGGGAGATAAAAGGTACACTCAACCCTGACTATGCATGTGGTGCTCCTGTTAGGGTGAGTACTAGTGAATCTCCAGACGCAACAGGGTTACCATCAAACATATCTGCAATTGCTAGTTGGCAGGTTGTTTGCAACATAACAACAAAGTCAAAAGGTGCAACACGTAAATGTTGTGTCTCATTTTCAGCCTATTATAATGAATCAGTTATTCCTTGTAACACATGTGCATGTGGGTGCCCCAATAACCCACACAGAACCTGTAGTACTGATGCACCAGCTATGTGGCTTCCATCAGATGCACTTCTTGTTCCTTTTGAGAATCGAACTGAAATGGCTGTTACTTGGGCTAGCATGAAACACCTACCAGTGCCCAACCCTATGCCTTGTGGTGACAACTGTGGTGTGAGCATTAACTGGCATGTATATACAGATTACCGTCGAGGTTGGACTGCAAGGATCACACTTTTTAATTGGGATGAGACAAACTTTGTTGATTGGTTTGCAGCAGTACAAATGGACAAAGCAGCAACAGGTTTTGAGGAAATGTATTCATTCAATGCAAGTACCTTAGGCAGCTTAAACAATACAATAGTCATGCAAGGTAAGCAGGGATTGAACTTTCTTGTAGCAGAAACAAATGGTTCTGACCCTCGAAGAGATCCTAGAGTACCAGGGAAACAACAGTCTGTAATCTCATTTACAAAGAAAAATACTCCTGGAATCAATGTGGCTGGTGGTGATGGATTTCCCAGTAAAGTGTTCTTCAATGGGGAGGAATGCTCTCTTCCATCTGTATATCCAAGCAGTGGTTTGAGGAAGCAGCTTTCCTTGGCTACTACGATGTTCCTAATACTGTTGCCCATCATCTTGATGCTGCAATAG 1953 0.4675 MAMHVHSCFCFFFTIAVITIFSAKPSLSQPQAADSCNGILLSYVHTGGAKLPPNVSDTAQQPYRFESTLTVLNNGLEELQAWRVFVGFQHHEWLVSASNAVLADGTSLPGSVGNGTVFAGSGVTDLKTAAATAGDLTQMQVRVELVGTQLGVAPPSVPMPSSINLANDGFVCGKPIGQGNNETHVCCTSDPNFKTNIATDEEFLPRQNGDLSIMYDVIKAYDSNYWAEVTIANHNPLGRLDNWRLSWDWNNDEFIFTMKGAYPSIVDSSECVFGPQGVFYKEIDFANVLNCEKRPTIIDLPPTRFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVYKMPPNINRSQLSPPQNWEIKGTLNPDYACGAPVRVSTSESPDATGLPSNISAIASWQVVCNITTKSKGATRKCCVSFSAYYNESVIPCNTCACGCPNNPHRTCSTDAPAMWLPSDALLVPFENRTEMAVTWASMKHLPVPNPMPCGDNCGVSINWHVYTDYRRGWTARITLFNWDETNFVDWFAAVQMDKAATGFEEMYSFNASTLGSLNNTIVMQGKQGLNFLVAETNGSDPRRDPRVPGKQQSVISFTKKNTPGINVAGGDGFPSKVFFNGEECSLPSVYPSSGLRKQLSLATTMFLILLPIILMLQ 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4420g00053 650 Pfam COBRA-like protein 225 404 IPR006918 GO:0010215|GO:0016020
Gabi4420g00053 650 PANTHER COBRA-LIKE PROTEIN 7 23 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4420g00053 Gabi-Chr4420 643495 646366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4420g00053 36 634 COBRA Gene Family AT4G16120 67.881 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4420g00053 - - gmx:100778971 1063.91