Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4420g00046 ATGTTAATTTCTCTTGCCAATGCTTGCCTGATGCATCTTGAAGGTTTATTGAATTCTGCTTTGAAAATGGGAGTTGAAAAAGAAGGGACAAAAACTGGAGGAGGATATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACCTCCAAATCCCGTAAGAAATTGTTTGCAACCAAGTCAGATTTACAAGAGCCTTTGAAACGGGGAAGAAAAGTCGATTACAATGTGGCAATGACACAACCCTATCTGGCGAATGAAGATGAAAATGGAGTAGGGGCAAGTGTTAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGCATGTGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTAGATTCCTTGCCCCCTTCCAGTTTTTCTGATCCGTATTCTACCCCATATTTTGATACCCGATCCCTTCAAGATGCTCAGTACTTCAGGAAAAACCTCAGTCATCAGCATGACCATCAGACCCTATATTCTGGAAAGCTGGTTGAAAAGGTTGAGGACCCTTCTAGGAACTTCATGGAGCCAAAACCTCAAAAGACCATTACTAGGCCAATTGAAAAGTTCCAAACAGAAGTATTGCCTCCAAAATCTGCTAAATCAATTCCGGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCTGGCTTTGTTCCAACCAATAATGCTGCTTATATAATGGAGGCTGCTGCAAGAATCATTGAACCAGGACCCCAAGCTGGTACAAAGTCTAAAACACCTCTGATAGCATCATCCGCAGTATCATTGAGGGTTAGAGATCTTAAAGATAAGGTTGAGGCTTCACAGAAGGGACCTCTAATTGGGTCATCTTCCATGACCCCTAGAGCTCGAGATCTAAAAGAAAAAAGAGAAATTTCTCATAGAACAAACAGGCTTTCAGAACCTTCTCAAAGTTCAGTCGAGTTGAATGCTACCAAGTATTTAAAGGGACAATCTTTGAACAGAAGCTGGAATGGATCTGTAGATACATCTGTCAAATCTCCTACACATGCAGAAGAAGATACTTCTTTGAAGAATAAGGGGAAGTCTATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTTGACTGGTGGCAGAAGTTTGGGGGGCCAGAAAGAGCATCTTGATATTAAACCCAACCAGCCATCGAAGCCAAATGTTCAGAAAAATTTTCATAAGAAATCTTCTAGTGTTCTAAGACAGAACAATCTGAAGCAGAATTATTCAGTTGAAAAAGAGAAATTACCATCAAAACCATTGGTTTCCAATTCACAGAGTAGAAAAGCTCTGACTGGGGATTCCTCTTGTGGACGTCATAGAAGCTCTAGTAGCAAATCCATTGCAAAAACTAAAGTTGGATCCAAAAAGTCAGCCATGGAGGTAACAGATGGTGAAAAGGAAGTTTTATATACCAGCACAAACAACTATCCTAGGAAGAAAAGGTCTACAGACAAAGATTGGAATGATAGGGTAGTGGATAATTTGTTCATTGACAGAACTCAAAAGCCTGTTAAGTCTAATCTAGTAAGTAATAAACAATATAGTTGGGCTGAAGAAGTTAAAACAAAAGACATGGATGTAGTTTCCTTCACATTTACCACACCATTAACAAGGAGCAACCCTGGTTTTGATACATCTAGACAAGCTGACCAGAATTCTAATGGTTTTTCCTTGGATCAACGCATCAAAAGAGTATTGCTTGACACAGACAATACAAGGTCTCCAATAGGATACAACGTGATTGGTGGTGATGCCTTAGGTATCCTTTTGGAACAGAAGTTGAGAGAATTAACACGTGGAATTGAAACCTCTTCTGATGACATTTCTAAAGTGAGGCAGCCTTCCATTACTCTACCAATGTCAAATGATCAAGTGACCAACCTTAATTTAGGTAACCTCAACCCGAATTTGCAACCGAAGAAAGATGGGGACATGTTATTTACAGGCAAGTTAAGCAGTAGCCATGATTCTGACTTCTCCACTGGTCTTCCTGAATTACCATTGAAACATAACTCATGGGTTGATGAGATGGAACCACAGTTATTCAATTGCCGACACCCAAGTCCAATCTCTGTTCTTGATCCTTCTGTTTCAATTGAAAGCTGTGATTCTTCAATGAGCACAGATGTTACTAGTACAGAAGGAAGCAAGTTGTGTTCATCTGTTCAAACTCAGGAAGTTCATGGCTTGAATTTTTCGAGGAAGTTCTATCCTACAGAATCTGATGCAGAGTTATCTGATTCAGCTTCTTCAACATCAGATGGGACCATGGTGAAGAAGCACACAAGTACATTTTCTGTCATGAAGTTTGGAAGATCAAGTACATGGGAGTTAGACTATGTGAAAGATATATTGTGCAATGTTGAGTTGATGTATATGAACTTTTCCCTTGGACGAGCTAGTGAGATTGTAAACTCCCATCTCTTCAACCAGTTGGAAAGCCGAAATGGAGGGTTGAAGTGTGATGCTGAGTTTAGGATAAGAAGGAGAATTACATTTGATTGTGTGAGTGAATGTTTGGACTTAAGATGTAGGCGTTATGTAGGGGGAGGATACAAAATGTGGACCAAAGGGGTTGTAATGGTGAAAAGAAATGAATGGTTGGCAGAAGATGTGTACAAGGAGATTTTAGGTTGGAGAGGGATGGGGGATTCAATGGTAGATGAGCTTGTGGACAAGGACATGAGCAGCCAATATGGAAAATGGCTAGATTTTGAGGTTGATGCTTTTGAACTTGGAGCAGAGGTTGTGGACCAAATATTTGATTCTTTGGTTGATGATGTTGTCACTGAAATCTTGCAATTGTAA 2862 0.4011 MLISLANACLMHLEGLLNSALKMGVEKEGTKTGGGYVGGFFQLFDWTSKSRKKLFATKSDLQEPLKRGRKVDYNVAMTQPYLANEDENGVGASVRGSCDHSYASSVTDDEACGTRAPGVVARLMGLDSLPPSSFSDPYSTPYFDTRSLQDAQYFRKNLSHQHDHQTLYSGKLVEKVEDPSRNFMEPKPQKTITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKNPGFVPTNNAAYIMEAAARIIEPGPQAGTKSKTPLIASSAVSLRVRDLKDKVEASQKGPLIGSSSMTPRARDLKEKREISHRTNRLSEPSQSSVELNATKYLKGQSLNRSWNGSVDTSVKSPTHAEEDTSLKNKGKSISLAIQAKVNVQRREGLSLTGGRSLGGQKEHLDIKPNQPSKPNVQKNFHKKSSSVLRQNNLKQNYSVEKEKLPSKPLVSNSQSRKALTGDSSCGRHRSSSSKSIAKTKVGSKKSAMEVTDGEKEVLYTSTNNYPRKKRSTDKDWNDRVVDNLFIDRTQKPVKSNLVSNKQYSWAEEVKTKDMDVVSFTFTTPLTRSNPGFDTSRQADQNSNGFSLDQRIKRVLLDTDNTRSPIGYNVIGGDALGILLEQKLRELTRGIETSSDDISKVRQPSITLPMSNDQVTNLNLGNLNPNLQPKKDGDMLFTGKLSSSHDSDFSTGLPELPLKHNSWVDEMEPQLFNCRHPSPISVLDPSVSIESCDSSMSTDVTSTEGSKLCSSVQTQEVHGLNFSRKFYPTESDAELSDSASSTSDGTMVKKHTSTFSVMKFGRSSTWELDYVKDILCNVELMYMNFSLGRASEIVNSHLFNQLESRNGGLKCDAEFRIRRRITFDCVSECLDLRCRRYVGGGYKMWTKGVVMVKRNEWLAEDVYKEILGWRGMGDSMVDELVDKDMSSQYGKWLDFEVDAFELGAEVVDQIFDSLVDDVVTEILQL 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4420g00046 953 MobiDBLite consensus disorder prediction 379 478 - -
Gabi4420g00046 953 Pfam Domain of unknown function (DUF4378) 795 945 IPR025486 -
Gabi4420g00046 953 MobiDBLite consensus disorder prediction 436 469 - -
Gabi4420g00046 953 MobiDBLite consensus disorder prediction 399 428 - -
Gabi4420g00046 953 MobiDBLite consensus disorder prediction 332 357 - -
Gabi4420g00046 953 MobiDBLite consensus disorder prediction 293 308 - -
Gabi4420g00046 953 Pfam DUF761-associated sequence motif 104 135 IPR032795 -
Gabi4420g00046 953 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 21 949 - -
Gabi4420g00046 953 MobiDBLite consensus disorder prediction 276 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4420g00046 Gabi-Chr4420 542957 546552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4420g00046 38 951 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 31.456 2.95e-93 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4420g00046 - - gmx:102669513 1411.74