Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4420g00009 ATGGAAGACTTATGCCATTTCAGTGAGTTCAGTTTCAGTGGAGTTGAGGACAAATATAGTTCATCAAATGATAGCTTATGGGCTCCTGAGGGACTGAATGAAGTGAAAAAGGTTCATTTTTCTGGAGCAGAAGATTGGGGAGAGTCTTCTGGTTTTGGGTTCATTCCAAATGATCCAACTGAAGATGAAGGATACCTTCTATCCACTAAGTATCACCAACAACCATCATATGAGGATTATGGACGACCATTGGATAACCTACAATTTGACATGGTGTCTCCACCACTCCAACCTTACCTTGGGGAAAACATCCAATTTGATGAACAAAATCCAACCTTGGTTCCACTTTATGACCAAAAAAGGAAAAGCACAACTCAACTCATTTAACCTCTTGAGATCTTGAATAACTATGGCAAGGGTTTCAAGAGGTTATGTGATGAAGGAAAAAGCCTGCAGCCAGTTCATGATTTGGGTGTAGTTAAAAATGAAGTTGGGAGAAAGCTTTCAACTGAAGATGTCATGAGGATAGCTGGAACAAGGTTCATTCAATCATCTTCAGAATCAGCAGGTTTACAATCCTTGGTGAATCACCCTTTTGGATTATCTTTATCTGAACTCTCTGATGAAGAGAAAGAGGATGTGGAACTTGCCGAATCACTCTTGGCTTCTGCTGAGAAAGTTGGCTGTCAACAGTTTGAACGTGCTAGCAAATTGCTGAGTCATTGTGAATCATTGTCTTCAAAAACTGGGAACCCCGTTAAGCGTGTTGTTCATTATTTTGCTGAAGTACTTCGCCAGAGGATAGATAAAGAAACAGGAAGAGTTTCGTATGAGGATTTGAAAAAGATGCAATCATTTGATCCTGAAGAGGCATTCAAGGACGTAAACCCTACCCTTTTGGCATTTGATGAAATGCTTCCTTTCTGTCAGGTTACACGGTTCACAGCAGTTCAAGCTATAATAGAAAATGTAACTGAGGCAAAGAAGATTCACATTATTGATCTTCAAATCAGAAGAGGGGTACATTGGACGACCCTGATGCAAGCCCTTGAATCAAGACATGAATGTCCACTTGAGCTTTTAAAGATAACAGCTGTTGGAAGTGGAACCACTTCAATACATATAATTGAGGACACTGGTAAGAGACTGAAAGATTTTGCTCAGAGTTTGAACATACCCTTCTCCTTTAACATAGTTATGGTATCAGACATGCTACATCTCAGAGAAGATCTTTTTGAAAGAGATCCTGAGGAAACAATTGCAGTTAATGCTCAGTATGCATTTGGAGGCAAGATTCAACAACCAAACCAACTTGAAACTATCATGAGAGTGATTAGAACCATTAATCCAATTGTAGTGGTGGTAGCTGAAGTTGAGACAAATCATAATTGTACATCTTTTGTGAAGCGTTTCATTGAAGCTTTCTTCCACTTCAGTGCATTCTTTGATTGTCCTGCTACTTGTATGCAACGGGATGAGAGACGAATGGCTATAGAATCAGTATACTACAGTCGAGGAATCAAGAATATTGTAGCTGCGGAAGGAGCAGAAAGAAAGACTCGATATGTAAAGATTGATGTTTGGAGGGCCTTTTTCCCTCGCTTTGGAATGGTGGAGACAGAATTGAGAATGTTATCTATATACCAAGCGGATTTGGTGGCTCAAAGATTTCCTTTTGGAAGTTTTTGCACATTTGATAGGAATGGGCATTGCCTTCTCGTTGGATGGAAAGGAACACCATTTTACTCTGTTTCTGCCTGGAAATTCATTTGA 1773 0.3971 MEDLCHFSEFSFSGVEDKYSSSNDSLWAPEGLNEVKKVHFSGAEDWGESSGFGFIPNDPTEDEGYLLSTKYHQQPSYEDYGRPLDNLQFDMVSPPLQPYLGENIQFDEQNPTLVPLYDQKRKSTTQLIXPLEILNNYGKGFKRLCDEGKSLQPVHDLGVVKNEVGRKLSTEDVMRIAGTRFIQSSSESAGLQSLVNHPFGLSLSELSDEEKEDVELAESLLASAEKVGCQQFERASKLLSHCESLSSKTGNPVKRVVHYFAEVLRQRIDKETGRVSYEDLKKMQSFDPEEAFKDVNPTLLAFDEMLPFCQVTRFTAVQAIIENVTEAKKIHIIDLQIRRGVHWTTLMQALESRHECPLELLKITAVGSGTTSIHIIEDTGKRLKDFAQSLNIPFSFNIVMVSDMLHLREDLFERDPEETIAVNAQYAFGGKIQQPNQLETIMRVIRTINPIVVVVAEVETNHNCTSFVKRFIEAFFHFSAFFDCPATCMQRDERRMAIESVYYSRGIKNIVAAEGAERKTRYVKIDVWRAFFPRFGMVETELRMLSIYQADLVAQRFPFGSFCTFDRNGHCLLVGWKGTPFYSVSAWKFI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4420g00009 590 ProSiteProfiles GRAS family profile. 207 588 IPR005202 -
Gabi4420g00009 590 Coils Coil 207 227 - -
Gabi4420g00009 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 192 581 IPR005202 -
Gabi4420g00009 590 Pfam GRAS domain family 217 588 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4420g00009 Gabi-Chr4420 91663 93437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4420g00009 206 589 GRAS Transcription Factor Family AT3G03450 29.412 1.15e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi4420g00009 GRAS 2.2e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4420g00009 - - gmx:100818523 740.339