Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4420g00007 ATGGACAACCAGAAGGAGCTGATAGTAGGAAAGGTATGTAAAATCTATGACAAAATCTCTACATTAGAAAGCCTCAATCCCTCCAACCATGTAAATAACCTCTTTACCCAACTTGTAACAACTTGCACTTCCCCATGTCAATTAGATGTTACACAGCTGAGCCAAGAAGTTAAAGAAACTATAGCAAAGTTAATTAGGCTTTGTGGGAAAGCTGAGGGACTTCTTGAAACCCATTACTCTGCTCTCATAGGATCTCATGAGAAACCATTGAACCACATCAAACTCTTCCCTTACTACTCAAATTACCTCAAACTTAGCCATTTGGAATTCACTATGCTCACCAGACACTGCTCTCAAGTTCCCTCCCAACTTGCCTTTGTTGGCTCTGGTCCCCTACCTCTTACCTCAATCATGTTGGCCACCTATTACTTTAGGCACACATGCTTTCACAACTACGATATTGATGCATTAGCAAATGCTAAAGCTTATGACTTGATCTCATCAGACCCTGACTTATCAAAACGAATGTTCTTCCACACAAGTGATATTGCAAATGTCTCAAATGGCCTTAAGGAGTATAACGTGGTCTTCTTGGCAGCACTGGTAGGCATGGACCAGAATGAGAAAACACAAGTCATTAATCACTTAGCTAAACACATGGCTCCTGGAGCTATTTTGTTGCTAAGGAGTGCACATGGAGCTCGAGCATTCCTCTATCCAGTTGTTGATGCTTCTGATCTCAAAGGTTTTGAAGTTCTATCAGTTTTTCACCCAACTGATGATGTTATCAATTCAGTTATTGTTGCACGAAAGCATTCAGTGAATCAAGGGCTATACTCACCAGTATTGTCTAGCAAATGCTCTGAAGTTGAAGGTTTTAATCCCTTAAACCATGGAAACGTTATTGATGAGTTGACCATTGATGACCAGGCTTGA 936 0.4071 MDNQKELIVGKVCKIYDKISTLESLNPSNHVNNLFTQLVTTCTSPCQLDVTQLSQEVKETIAKLIRLCGKAEGLLETHYSALIGSHEKPLNHIKLFPYYSNYLKLSHLEFTMLTRHCSQVPSQLAFVGSGPLPLTSIMLATYYFRHTCFHNYDIDALANAKAYDLISSDPDLSKRMFFHTSDIANVSNGLKEYNVVFLAALVGMDQNEKTQVINHLAKHMAPGAILLLRSAHGARAFLYPVVDASDLKGFEVLSVFHPTDDVINSVIVARKHSVNQGLYSPVLSSKCSEVEGFNPLNHGNVIDELTIDDQA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4420g00007 311 Pfam Nicotianamine synthase protein 2 274 IPR004298 GO:0030410|GO:0030418
Gabi4420g00007 311 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Gabi4420g00007 311 PANTHER NICOTIANAMINE SYNTHASE 3 3 278 IPR004298 GO:0030410|GO:0030418
Gabi4420g00007 311 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4420g00007 Gabi-Chr4420 60253 61188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4420g00007 1 306 Nicotianamine Synthase Gene Family AT5G04950 52.997 5.38e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4420g00007 K05953 - gmx:100814069 503.827