Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4420g00001 ATGGCGTTTTGGTGGCCCTTGCTCGTTCTAGCATTCGCTTTCGCCATCTGCAAGTTCCTTCTCATGCTCATTCCTCCCAAGGTTCCTTCCATCGATGTTGACGCTTCCGATGTGTTGGACGATGGAAACCAAGCGCAGGAGAACAGCTTCATATATGTGCCGCCGAGGGGAACGGCTCAGCAATCAGGAAAGAAAGTTCAGTGCTATGAGCCTGCTACCATGAAATATTTGGGATATGTACCTGCATTGACACCGGATGAGGTTAAGGAGCAAGTGGAAAAAGTACGAAAGGCGCAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGACGCCAGTTTTTGCGTATACTTCTGAAATATATAATTAAACACCAAGCGCTTATATGCGAAATATCTTCACGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACGTGTGAGAAGATCAATTGGCTGCTGTCAGAGGGTGAACAGTGGCTAAAGCCTGAGTACCGATCCTCTGGAAGATCAATGTTTCATAAGAGAGCCAGAGTAGAATTTCATCCTCTTGGTGTTATTGGTGCCATTGTGTCATGGAACTATCCTTTCCACAATATATTTAACCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGGTTAAGATATCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCTCTTGCTGCCATAGGAGCTCCAGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTTGTATCTTCTGCTGATAAAGTCATTTTTGTTGGATCACCTGGGGTTGGTAAGATGATAATGAGAAATGCTGCTGAGAAACTTATACCAGTTACACTGGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTAGATGTGGACCATGTTGCTCAAATTGCTTGCAGGGCTGTTCTTCAGTCATCTGGGCAGAACTGTGCTGGGGCTGAACGATTTTATGTCCACAGGAACATTTATTCATCTTTTGTCAGTAAAGTTACCAAAATCATAAAATCTGTTACAGCTGGTCCACCACTTGCTGGAAAGTATGATATGGGTGCTTTATGCATGTATGAGCATTCTGAAAAGCTTGAAGGTCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAGTTGTTGCACGTGGAAGTTTTGGACGTATAGGTGAAGGTGCAGTTGATCAATATTTTCCACCTGCTGTCATTGTGAATGTGAATCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTCAGCTCTGATGAAGAGGCTGTCAAGCTTGCAAATGACTCAAAATATGGGCTTGGCTGTGCTGTTTTCTCAGGCAGTCAGAGTCGTGCCAGAGACATAGCTTCCCAGATACATTGTGGGGTTGCTGCAGTTAATGATTTTGCTGCAACATACATGTGTCAG 1491 0.4326 MAFWWPLLVLAFAFAICKFLLMLIPPKVPSIDVDASDVLDDGNQAQENSFIYVPPRGTAQQSGKKVQCYEPATMKYLGYVPALTPDEVKEQVEKVRKAQKMWAKTSFKQRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQWLKPEYRSSGRSMFHKRARVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVVKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSADKVIFVGSPGVGKMIMRNAAEKLIPVTLELGGKDAFIVCEDVDVDHVAQIACRAVLQSSGQNCAGAERFYVHRNIYSSFVSKVTKIIKSVTAGPPLAGKYDMGALCMYEHSEKLEGLVNDALDKGAEVVARGSFGRIGEGAVDQYFPPAVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEAVKLANDSKYGLGCAVFSGSQSRARDIASQIHCGVAAVNDFAATYMCQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4420g00001 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 304 IPR016162 GO:0016491
Gabi4420g00001 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 493 IPR016163 GO:0016620
Gabi4420g00001 497 FunFam Aldehyde dehydrogenase A 301 495 - -
Gabi4420g00001 497 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Gabi4420g00001 497 FunFam aldehyde dehydrogenase 22A1 65 320 - -
Gabi4420g00001 497 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 59 492 - -
Gabi4420g00001 497 Pfam Aldehyde dehydrogenase family 61 493 IPR015590 GO:0016491
Gabi4420g00001 497 SUPERFAMILY ALDH-like 60 492 IPR016161 GO:0016491
Gabi4420g00001 497 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4420g00001 Gabi-Chr4420 38 6782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4420g00001 1 497 Aldehyde Dehydrogenase Gene Family AT3G66658 79.879 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4420g00001 - - gmx:100802990 928.702