Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4418g00006 ATGGCTGAGTCCACTCCAATTTCAACTCCTACTAACGACACCAACGCCGTCGCAGAGTCATCTTATTTCCGACGAACGGTTTGCTTGTACGATTGGTGGTTGGTTAGAGCCCAAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCAGGCGTGTCATCAAGAAAGGAAGAAGCAATTCGGGTGTTTGTTTCTGCTCCTGTTATCAAAAGATATGATGTGTTTAACCTTGAGACTGCGGATGGGATATACGTTATCATCAATGGTTTCATTAACGAGCAACGCACACTCGAAAATGGTTTCTCCCCTGAGGTTTTCAACCGTTTTATATTTGGCTTTCCTTCAAACTGGGAAAGCTATGTCATAGATTGTTTCAGAGAGGAATCAACCACAGACATTGATTTGGGTGGTGCTGTTTCTGATAATGTAATAGCAATTCGTCCTGAAATCTTATCAGATGAAAAATCTATTCCAACTCCTGTAGCTTCACCTGAAGAGGCCACGGTTGATCACGAGAAACCGTTTCCTGAAGGTGAATGCAATGCTTCGAAGGAGATGGGTGGGGTTAATGTTGCTTATGGTAGTTGCAGGAGTAAACGTAGTGCCAGGTTGCATAATATTGATGTCTGCCAGCAGAAGAAGCAGCCTGCTTCTGGAGGTCTTCCAAAGTATCCAGATGAAGAGAAGAGCTCTACCTCAGCGGCCTTGGAGAATTGTGATGGAGAACAACTCAAAAGTCCGGTGACACCCATTCAGTCACGATCACATGAGAAGCCATTCTCTGACAATGAATGCAATGCTTCGAAGGAGAAGGTTGGGGTTAATGTTGCCTGTGGTAGTAGCGGGAGTAGACATAGTGCCAGGTTGCGCAATATTACAGTCTGCCAGCAGAGGAAGCAGCCTGCTTCTGGAGGTCTTCCAAAGTATCCAGATGAAGAGAAGAGCTCTACCTCAGCGGCCTTGGAGAATTGTGATGGAGAACAACTCAAAAGTCCGGTGACACCCATTCTGTCACGATCACATGAGAAGCCATTCTCTGACAATGAATGCAATGCTTCGAAGGAGAAGGTTGGGGTTAATGTTGCCTATGGTAGTAGCGGGAGTAGACATAGTGCCAGCTTGCGCAATATTACAGTCTGCCAGCAGAGGAAGCAGCCTGCTTCTGGAGGTCTTCCAAAGTATCCAGATGAAGAGAAGAGCTCTACCTCAGCGGCCTTGGAGAATTGTGATGGAGAACGACTGAAAAGTCCCGTGACACCCATTCAGTCACAATCACATGAGAAACCATTCTCTGACGATGAATGCAATGCTTCAAAGGAGATGGGTGGGGTGAATGTTGCCTGTGGTGGTAGCAAGAGTAGACGTAGTGCCAGGTTGCGTAATATTAAAGTCTGCCAGCAGAATAATCAGCCTGCTTCTGGAGGTCCTCCAAAGTATCCAGATAAAGAGAAGCGCTCTAACTCAGTGGCCTTGGAGAATCATGATGGAGAGGGACTGAAAATTCCAGTGACACCCAGTGAGTCACAATCACAGGGACAAGTAAACACATCATCCCAGCAGCTAGCTAAAAAATCTGTATCCAGAATTTCTGGAACTTTGTCAGCAAAAACTGAAGGCTGTTATAAGAAAAAACCAGTGACAGTTAAAACAAAAGGGATCAGTCCTAAGAGAAAAATGACTAAATCTGCATCCGCTGTGAAATATCCTCGTGTAAAGGATGTAAGCCCCTTGATAAAGGGAGGCAAACGGAAAATATCCTCAGTTTCTCCAGAGTCATTGAGTTTCAGAAAATCCAGATCTGGTAGGTTGCTTCTTCCTCCTTTAGAGTTTTGGCGCAATCAAATACCAGTTTATAATGCGGACCATGAGATTACAGAAATTCAGGAAGGTGCATCTGTGGTTTGGGAAAGAAAGGAGTAA 1917 0.4517 MAESTPISTPTNDTNAVAESSYFRRTVCLYDWWLVRAQNDFQGKRLAVAGVSSRKEEAIRVFVSAPVIKRYDVFNLETADGIYVIINGFINEQRTLENGFSPEVFNRFIFGFPSNWESYVIDCFREESTTDIDLGGAVSDNVIAIRPEILSDEKSIPTPVASPEEATVDHEKPFPEGECNASKEMGGVNVAYGSCRSKRSARLHNIDVCQQKKQPASGGLPKYPDEEKSSTSAALENCDGEQLKSPVTPIQSRSHEKPFSDNECNASKEKVGVNVACGSSGSRHSARLRNITVCQQRKQPASGGLPKYPDEEKSSTSAALENCDGEQLKSPVTPILSRSHEKPFSDNECNASKEKVGVNVAYGSSGSRHSASLRNITVCQQRKQPASGGLPKYPDEEKSSTSAALENCDGERLKSPVTPIQSQSHEKPFSDDECNASKEMGGVNVACGGSKSRRSARLRNIKVCQQNNQPASGGPPKYPDKEKRSNSVALENHDGEGLKIPVTPSESQSQGQVNTSSQQLAKKSVSRISGTLSAKTEGCYKKKPVTVKTKGISPKRKMTKSASAVKYPRVKDVSPLIKGGKRKISSVSPESLSFRKSRSGRLLLPPLEFWRNQIPVYNADHEITEIQEGASVVWERKE 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4418g00006 638 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 4 630 - -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 362 533 - -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 209 265 - -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 502 533 - -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 363 384 - -
Gabi4418g00006 638 Pfam SANTA (SANT Associated) 27 119 IPR015216 -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 296 330 - -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 459 473 - -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 230 255 - -
Gabi4418g00006 638 MobiDBLite consensus disorder prediction 155 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4418g00006 Gabi-Chr4418 70676 73792 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi4418g00006 SANTA 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4418g00006 - - vun:114192171 461.84