Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4411g00005 ATGAGTTCCCAGAGTCTCACATTCCTTGCAAGCCTGTTTCTTTTGCAGCTTATAGCTAGTTGTCAAGCTCAACTACGTGTTGACTATTACAGAAACACATGCCCAAATGTTGAATCAATAGTTCGCACTGCAGTTGAGATGAAATTTCAGCAGACATTTGTGACAGCACCTGCTACACTTAGGCTCTTCTTCCATGATTGTTTTGTTCGGGGATGTGATGCTTCAGTGATGCTAGCTTCAAGAAGCAGCACTGCAGAGAAGGATAACCCTATCAATCTTTCACTAGCGGGTGATGGGTTTGACACTGTGATCAAAGCAAAGGCTGCGGTTGACAATGTACCTGGCTGCCAAAATAAGGTTTCTTGTGCTGATATATTGGCTATGGCAGCTAGGGACGTCATAGCATTGACAGGAGGACCATCTTATGAAGTAGAGTTGGGAAGGCTAGATGGGAGAATCTCTACAAAAGCCAGTGTTAGACACCATCTACCTCATCCTGAATTCAAACTAGCACAGCTGAACCAAATGTTTGCTTCACATGGCCTCACCCTTGAAGATCTAATTGCTCTATCAGGAGCACATACTATTGGGTTCTCTCACTGCAGCCAGTTCTCCAAACGAATTTACAACTTCAGAAGCAGGAACAGAATTGATCCAACACTTAATCCTGCATATGCAAAACAGCTCCAGCAAGTGTGTCCAAAAAATGTGGACCCCAGATTTGCCATTGGAATGGACCTAACTACGCCTAGGACATTTGATAACCAGTACTACAAGAATCTTCAGGAAGGAAAAGGACTCCTTTCTTCTGATCAATCTTTGTTTACTCATAAAAGATCAAGAGACCTAGTGAACTTATTTGCAACCAACAGCACAGCCTTTGAAAAGTCTTTTATAATTGCTATGACAAAGCTTGGACGGATTGGGATCAAAACGGGAAAGAAGGGTGAAATCAGGCGTGATTGCACAATGGTTAATTGA 981 0.4271 MSSQSLTFLASLFLLQLIASCQAQLRVDYYRNTCPNVESIVRTAVEMKFQQTFVTAPATLRLFFHDCFVRGCDASVMLASRSSTAEKDNPINLSLAGDGFDTVIKAKAAVDNVPGCQNKVSCADILAMAARDVIALTGGPSYEVELGRLDGRISTKASVRHHLPHPEFKLAQLNQMFASHGLTLEDLIALSGAHTIGFSHCSQFSKRIYNFRSRNRIDPTLNPAYAKQLQQVCPKNVDPRFAIGMDLTTPRTFDNQYYKNLQEGKGLLSSDQSLFTHKRSRDLVNLFATNSTAFEKSFIIAMTKLGRIGIKTGKKGEIRRDCTMVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4411g00005 326 FunFam Peroxidase 164 305 - -
Gabi4411g00005 326 PANTHER - 9 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gabi4411g00005 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gabi4411g00005 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 Gene3D Peroxidase, domain 2 164 305 - -
Gabi4411g00005 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 Gene3D - 28 326 - -
Gabi4411g00005 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 Pfam Peroxidase 42 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 FunFam Peroxidase 28 174 - -
Gabi4411g00005 326 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4411g00005 326 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4411g00005 Gabi-Chr4411 43638 46025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4411g00005 23 326 Peroxidase AT4G30170 68.421 8.89e-158 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4411g00005 K00430 - gmx:100793327 556.214