Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4400g00001 | ATGGATTGTGATCAAGAAAACAAGTTCGATGATGATTTACATCAGAAGGACGATGATAAGAAAGAAGGGTTAGATCATGCCAAGAATTCCTCTGAAGAGAAAGAGAAGATGAATAGTCCAGTACCTTCTGAGTCTTCTGAAGTTGGTAATAAACCAAAGGGTAAAGAAGGGTCGCCAGATCAGAAATCTGCAGCTTCAGGAATACACAAGTGTGTGTTCTGTGGGAAGGAGTTTAAATGTGGAAAAGCGTTAGGTGGCCACAAAAGATTCCACCTTCAAGCTCAGAAGAAGAAGGACAAGGAGGATAAAAAGGCGGCTATTAGTAATGAGATCAAGATGTCTTCTTTGATGTCTAATGGGAAACACTGTTGTTTACTTTGTGACAAGGATTTCCCATCACAAAAGTCCTTGTATGGGCATATGAGGTCCCACCCTGATAGGGTTTGGAGGGGTGTTTGCCCTCCAACAACAACCTCTGATAAGCAAGGTTCTAGTTCCCCAAACTCTGCCTCTATAGAAGAGATTAAACATGATAATTTTGATTTTGGTGCAGTTGTTGTTGCACCAAATAAACCAGCTATTGATCTATCAAAAATTCTACCCCCAACCTGGCGTAAAACCTATAGAAGAGGCAGGGAAAGTCTTTATAGTGCTGAGACTTTTGAAGCATCTAAAATTATTATGTCTTTGTCTAAGGGTAGTTTGCCATGTGATAAGAATAAGAAAGGAAAGCAATTGATTGAATTCGAGGATGAGAAGGAGAAGGAGGAGGAGCATAGGTATGCTAAGTGGATTAGAGAGGAGTGTAATTATGTGAAGAAGATGAAAAGAGCATGGAATGGTATGAACACTCATGAAGCATCATCTAGTGGGGTGAAAGATCAT | 885 | 0.4011 | MDCDQENKFDDDLHQKDDDKKEGLDHAKNSSEEKEKMNSPVPSESSEVGNKPKGKEGSPDQKSAASGIHKCVFCGKEFKCGKALGGHKRFHLQAQKKKDKEDKKAAISNEIKMSSLMSNGKHCCLLCDKDFPSQKSLYGHMRSHPDRVWRGVCPPTTTSDKQGSSSPNSASIEEIKHDNFDFGAVVVAPNKPAIDLSKILPPTWRKTYRRGRESLYSAETFEASKIIMSLSKGSLPCDKNKKGKQLIEFEDEKEKEEEHRYAKWIREECNYVKKMKRAWNGMNTHEASSSGVKDH | 295 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4400g00001 | 295 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 71 | 91 | IPR013087 | - | |
Gabi4400g00001 | 295 | MobiDBLite | consensus disorder prediction | 155 | 170 | - | - | |
Gabi4400g00001 | 295 | PANTHER | ZINC FINGER PROTEIN ZAT2-RELATED | 96 | 294 | - | - | |
Gabi4400g00001 | 295 | MobiDBLite | consensus disorder prediction | 149 | 170 | - | - | |
Gabi4400g00001 | 295 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 122 | 144 | IPR013087 | - | |
Gabi4400g00001 | 295 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 69 | 96 | IPR013087 | - | |
Gabi4400g00001 | 295 | MobiDBLite | consensus disorder prediction | 1 | 65 | - | - | |
Gabi4400g00001 | 295 | SUPERFAMILY | beta-beta-alpha zinc fingers | 68 | 144 | IPR036236 | - | |
Gabi4400g00001 | 295 | Pfam | C2H2-type zinc finger | 122 | 146 | - | - | |
Gabi4400g00001 | 295 | Pfam | C2H2-type zinc finger | 69 | 93 | - | - | |
Gabi4400g00001 | 295 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 123 | 144 | IPR013087 | - | |
Gabi4400g00001 | 295 | Gene3D | Classic Zinc Finger | 66 | 144 | - | - | |
Gabi4400g00001 | 295 | SMART | c2h2final6 | 122 | 144 | IPR013087 | - | |
Gabi4400g00001 | 295 | SMART | c2h2final6 | 69 | 91 | IPR013087 | - | |
Gabi4400g00001 | 295 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4400g00001 | Gabi-Chr4400 | 223 | 1202 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4400g00001 | 69 | 155 | C2H2 Transcription Factor Family | AT2G26940 | 36.937 | 1.76e-14 | 70.5 |