Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4392g00004 ATGCTTGCAAAGGCAATTGCAAATGAATCCGGAGCAAGTTTCATAAGCATCTCAGTGTCCTCCATCATTTCAAAATGGTATGGAGGAGCTGAAAAGAATGTCCGAGCTTTGTTTACAGTGGCAGCAAAGGTTGCCCCAACTATTATTTTTATTGATGAGGTTGATAGCATACTTGGGCAACGGACTAGAGCTGGACAGAATGAGACAATGAGAAGTATTAAAAATGAATTCATGATCCACTGGGATGGGTTATTGACAAAACCTGGTGAGCAAATTTTGGTTCTTGCTGCAACCAACAGGCCATTTGATCTTGATGAAGCAATTATAAGGCGGTTTGAGCATAGGATCATGGTTGGTCTTCCATCTACTGAAAACAGGGAAATGATATTGAAAACTCTCCTGGCTAAGGAAAAACATGAAAATATAGACTTCAAAGAGCTTTCAACCATGACACAAGGATATAGTGGAAGTGATCTTAAGGTTCATTTTCCTGGTTACTCTGAATTTGTGCTCGACTGCTGCTTATCGACCAGTTGGGAGCTAATACAGCAGGAGAGGTTGAAGGAAATGGAAAAAAAGAAAATGGAGGCAGAAGTTCAAAGCTCAGAAGATGCTTCCAATGCTACAGAAGGTAACGAAGACCATGTAATTATCTTGAGGCCTATAAACATGGAAGACATGACACAGGCAACGAGTCAGGTGGCTACAAGTTTTGATGTAGAAGGCTCAATAATGAAGGAACTGAAACAGTGGAATGATTTATATGGAAAAGGAGGTTCAAGGAAGAAACAATACCTAACCTATTTCCGTTAA 813 0.401 MLAKAIANESGASFISISVSSIISKWYGGAEKNVRALFTVAAKVAPTIIFIDEVDSILGQRTRAGQNETMRSIKNEFMIHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFEHRIMVGLPSTENREMILKTLLAKEKHENIDFKELSTMTQGYSGSDLKVHFPGYSEFVLDCCLSTSWELIQQERLKEMEKKKMEAEVQSSEDASNATEGNEDHVIILRPINMEDMTQATSQVATSFDVEGSIMKELKQWNDLYGKGGSRKKQYLTYFR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4392g00004 270 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 269 - -
Gabi4392g00004 270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 160 IPR027417 -
Gabi4392g00004 270 Coils Coil 180 200 - -
Gabi4392g00004 270 Gene3D - 122 237 - -
Gabi4392g00004 270 MobiDBLite consensus disorder prediction 193 213 - -
Gabi4392g00004 270 ProSitePatterns AAA-protein family signature. 92 111 IPR003960 GO:0005524|GO:0016887
Gabi4392g00004 270 Gene3D - 1 238 IPR027417 -
Gabi4392g00004 270 Pfam ATPase family associated with various cellular activities (AAA) 1 119 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4392g00004 Gabi-Chr4392 57215 61497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4392g00004 1 161 Calmodulin-binding Proteins AT3G56690 36.970 1.66e-28 112