Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4382g00006 ATGAAATCTACCAGAGAGAAAGACGACGATCGATGCATCACTTGGCATATGCACACCCTCCATCGCCGTCTTCTTCATGCCTTAGACCTTGGCACCAGACATTTTGATGAGAAGACAAAAAGATGGAATTGGCAGTGCGCAAACATTGAAGTGCAGAAAAATGTACTGCGATCGATTGATGCATTTCTTGATTCTATATCAGGAAATGCACGTGCAGCACATCATGCTATCTTTAAGGAATCTCTTGCTGATGTTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGTTTCCTTGTTAAGCATGTCATCAAATGTGGCAGTGAAGTTAGTTAGTGTTTTCCCAAATCCACTATTGCAATCACATATGTTGGATCTTGTCTGTTGTCTATCATCCTTGCTATCTTCGCATCAAATGGAAGTTGCAATACCCTGCGCTACTGCTCTGAATTTGGTAATCTCAAATTTGAATGCTACAAGTGAGAAGGCAGTTATGAAAGCATTGAAAGAAACAGATATTTCCATTTGTATTGTTGGAAATATAAAAGATTGTGCTGGAGATGTGAAGAAAATTGAATATTTTGAAGAGATGGCTTCCCTTTTGAGCACAATACTGTGGCGGTGGCCTCTGTCTAGGTTCCCTGTTTGTGATGATGTTAAACTTATGAAAGCTTTAGCAAACATGCATACAAGGACAGATAGTGCTATTAGACTTGTACTTTTAAAGTTGTACACATCTTTAGCTTTATGTGACTCTGTAGCAAAAAAACTTATAGCGGATGGAGAAGTATTTCTACAAATGATTGTGCAGGCGATGGGAAAATCAAATCCTGATATTGTTCGGGTTGAGGGATTTAGGCTTGCTCAATGTGTATTGAGGTCCCAAGAGAATTGTTTAAAAATGGTGGATTTGTGTGGTGAAGCTCTTGTTGATGCCATAATTTGTGGGATGAGAGAAACAAGGCTGAGTTCTAAAAAAATTGGGAACAACCATGGTTCTTTATTAGGGGAAGCATGTCAGTTGGCTCTAATTACTCGTTGGACAGGTGATCATCACACCAGTTTTTGGAAACAAGGAATTGATAAAGTCCTTCTTAATCTTCTGATTGAAAATATTCAAGACCAGTCACCTGAACTTGTCTTGTCATTGGAAAAACAAATATCCATGGTGAAGGAGGGATTAAAAGCCAATTATCATCTTGGTCTGAGGAGTTATCTATGGGACATTCTTGGGGGGCTTTCAATTCATTGTGGAGAAAATTTAAACTCTTGCACCCATGGAAGTGAGCTCCACATCAACTTACTAATTACATGTGCATGCTTGACTTTTGTGGATACAATGCAAAAATGGTGCCGAATATGTCAAAAGGATGTTGATGATAATTTTCAAAGCGAACCAGTATCAAGGGCTGTTCTAATGATGATTTATTCTCCATGTAATTACATTTCCTCACATGCTAGATTCTTATTATCTGATATACTTAAGGTGGAAGGCATTCCATGCTTGGAAAACTTAATCCATACTCTGGATTATACATCATCCCTAGAAAGCTATGGGTTGTTTGATAAACTTCAACTTGTTATTAACTTGATAGGGTTAACTTGTCTTTCAAGTTTACCACAGTTTCAAAGATGTATCATTGAAAGCAACGGGATGAAAGCAGTTCTTCTTCTTGTGAAACGATGCTTAAGTAATGACATTCATGTAGAAAGGCCTAGCTTTGCTCCTCATTTGCATACAAGATTCCATGAAAGGTCCTGTTGCTGTATTTATAAAGAAGATTGGGAAGGTTCCAATGTTCTCTTATTTTATGGCTTGTGGGGCTTAGCTGAATTTCTTCACCAATGTGGCCTTTTACAAGATAATCCTCAGAAATTTACTAGCAAGGTGACATACATTAAAGATCAATTAGTTAGCGAACTTCATGAGATCTGTAGTAGCACCTCTTTCAGTCCTGGAGTGAGATGGTATGTTTCTTATATTCTTAGTTATTTTGGATTTTATGGTTTCCCAAATGAATTAGCCAAAAGGATTGGGAAATCTCTTAATGAGGAAGAATATGCAGACTTGCGACTCATAGCAAATGGGGATTGTGTGAATGTTCATGGTGTTATTCTTGCTGTACGGTGTCCATCATTGCTGCCTCCTGAAGTGTTGCCTAGTAGTAAGAGTTCTAAAGAGGTAGCAGATAAGTTTGTTGGAGGGACTATGAGAGAAGTTCGTTTGTCTGCTCATGTTGATTATGAAGCATTGGTGTTGTTGTTGGAATATATATACTTAGGATGCTTACATGCCGGAGAAGAAATGGTAAAGAAGCTGAAAATTCTTGCTAAGCGCTGCAATCTACAGCCTCTCTTGCAAATGCTTTATAGACAATCTCCAAAGTGGGGTACACCTTTCCCCAGCTCTGATCTTAGTCATCTTACTTCATCTCTTGATTCAGCTGGAAGTTCTTTTTCGGATGTCGTATTGGAAGCTAAAACAAATGAACTTGTTGGGTGGAAATGCAATATTTGTTCTCACTCAGTACCACATTTGCATGTTCACAAAGTTATATTGCAGTCTGGTTGTGATTATTTACGGGGTTTGTTCCGATCAGGAATGCAAGAGAGTCATTCGCAAGTCATAAAGATTGCTATTAGCTGGGAAGCATTGATTAAACTAGTACAGTGGTTTTATTCCAATGAACTGCCAAATCCTCCCTCTGGATGTGTGTGGGATAATATGGATGACGAAGAAAAGCTATTCAATCTGCAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATTTTGGAAAATATTCAGGAAGCCTGCTGGAATGTGGTTATGTCTTGTCTTGATTCTTCCAAGCAGTTGTCCATTAAGATAATCAAAATGGCTTATAATCTCTCTTTGTGGAAGTTGGTTGACATTGCAGCAAATCTCATAGCTTCTTCATATAGTCAATTACGAAATTCTGGCGAACTTGAAGAGTTTGATGATGCGCTAGTTCACTTAATTTATTCTGCTTCTGTTCGACTTACCCAAGAAGGCGAAAATTGCTTTAGGTGA 3060 0.3837 MKSTREKDDDRCITWHMHTLHRRLLHALDLGTRHFDEKTKRWNWQCANIEVQKNVLRSIDAFLDSISGNARAAHHAIFKESLADVLGALLWILQCKSVSLLSMSSNVAVKLVSVFPNPLLQSHMLDLVCCLSSLLSSHQMEVAIPCATALNLVISNLNATSEKAVMKALKETDISICIVGNIKDCAGDVKKIEYFEEMASLLSTILWRWPLSRFPVCDDVKLMKALANMHTRTDSAIRLVLLKLYTSLALCDSVAKKLIADGEVFLQMIVQAMGKSNPDIVRVEGFRLAQCVLRSQENCLKMVDLCGEALVDAIICGMRETRLSSKKIGNNHGSLLGEACQLALITRWTGDHHTSFWKQGIDKVLLNLLIENIQDQSPELVLSLEKQISMVKEGLKANYHLGLRSYLWDILGGLSIHCGENLNSCTHGSELHINLLITCACLTFVDTMQKWCRICQKDVDDNFQSEPVSRAVLMMIYSPCNYISSHARFLLSDILKVEGIPCLENLIHTLDYTSSLESYGLFDKLQLVINLIGLTCLSSLPQFQRCIIESNGMKAVLLLVKRCLSNDIHVERPSFAPHLHTRFHERSCCCIYKEDWEGSNVLLFYGLWGLAEFLHQCGLLQDNPQKFTSKVTYIKDQLVSELHEICSSTSFSPGVRWYVSYILSYFGFYGFPNELAKRIGKSLNEEEYADLRLIANGDCVNVHGVILAVRCPSLLPPEVLPSSKSSKEVADKFVGGTMREVRLSAHVDYEALVLLLEYIYLGCLHAGEEMVKKLKILAKRCNLQPLLQMLYRQSPKWGTPFPSSDLSHLTSSLDSAGSSFSDVVLEAKTNELVGWKCNICSHSVPHLHVHKVILQSGCDYLRGLFRSGMQESHSQVIKIAISWEALIKLVQWFYSNELPNPPSGCVWDNMDDEEKLFNLQPYVELCWLAEFWILENIQEACWNVVMSCLDSSKQLSIKIIKMAYNLSLWKLVDIAANLIASSYSQLRNSGELEEFDDALVHLIYSASVRLTQEGENCFR 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4382g00006 1019 Gene3D Potassium Channel Kv1.1; Chain A 671 793 IPR011333 -
Gabi4382g00006 1019 CDD BTB_POZ_ZBTB_KLHL-like 688 781 - -
Gabi4382g00006 1019 CDD BTB_POZ_ZBTB_KLHL-like 820 898 - -
Gabi4382g00006 1019 SMART BTB_4 821 949 IPR000210 GO:0005515
Gabi4382g00006 1019 SMART BTB_4 689 798 IPR000210 GO:0005515
Gabi4382g00006 1019 Pfam BTB/POZ domain 846 912 IPR000210 GO:0005515
Gabi4382g00006 1019 SUPERFAMILY POZ domain 818 945 IPR011333 -
Gabi4382g00006 1019 ProSiteProfiles BTB domain profile. 821 902 IPR000210 GO:0005515
Gabi4382g00006 1019 SUPERFAMILY ARM repeat 48 424 IPR016024 -
Gabi4382g00006 1019 PANTHER OS06G0674800 PROTEIN 5 1014 IPR044953 -
Gabi4382g00006 1019 SUPERFAMILY POZ domain 667 789 IPR011333 -
Gabi4382g00006 1019 Gene3D Potassium Channel Kv1.1; Chain A 807 989 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4382g00006 Gabi-Chr4382 18632 32292 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gabi4382g00006 BTB 1.9e-06 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4382g00006 - - mtr:25487018 1612.05