Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4373g00003 | ATGGAGGGCGAGGCCGGTTCGGAGGGACACAATAGGGGTGGCGCAGATGATAACAGCAACGACAATAATGGAAGCAATAGCAAGATTGCGAATTCCAATGAGGGGCAGAGCAAGCCCAAGCGCCAGATGAAGACCCCCTTTCAGCTTCAAAATCTCGAGAAAGCTTATGCTTTGGATACTTATCCTTCGGAGGCGATGAGATTAGAGTTGTCGGAAAAGTTGGGGTTGTCGGATCGGCAACTGCAGACGTGGTTCTGTCATAGGAGGTTGAAGGACAAGAAGGACTTGCCTCCCAGGAAACGGCCGCGGAAGGTGGCAGCAGAGCCTTTGCCAGATTCCGACTTGCCTCCCAAGAAACGGCCGCGGAAGGTGGCAGCAGAGCTTTTGCCAGATTCCCCCACAGATGACATGAGGTTGGACCCTGAACTTGGCAATGAGTATGGATCCGGGTCGGGTTCGGGGTCCAGCCCGCTTACCCGTTCTGAGTCCCGGAATGCGATGCCCCAGGGCTTGCCGGGTTATTATGAGTCCCCTCAGGCTGGAATGGAGAGTAGAGCAATTGCTTCTGTGGAGGCACAGTTAGGGGAGCCGTTGAGGGAAGATGGACCCATTCTAGGAGTAGAGTTTGACCCATTGCCACCAGATGCATTTGGGGCACCCATAGTTACAGAACAGCGGAAGCGACCTAGTCTTGCCTATGACAGTAAAATATATGATAGGCATGATATGAGAGCAAATAAGGCTTTGGCAAGGACATTCCATGAATATCAATTTCTACCAAACCAGTCTGGCATTAGGACTGATGCTTTTGGACAGTTCAGCCAACCTCATTTACATGATCCAATGGAGGGTCCTGCCAGAAACCCTCCTTTTGTTCTTGGAAATGAACAGCCACCTAGAATTCATGCTACCAAAGGTCATTCTTCTCGTTCACAACAAGACAAGCAAGGGATTCCCTATCAGTCTCCTCCTGGAGATAAAGATGATGCCCCCCAAACGGAATTATACACAAACATAGCTAATATCGGAATGAACTCTCACTTTACTGATCACCAAATTGTTGGGCCAGAAAGTCCCTCTGCTTTACCTAGTGGACAAGTTTTGCCTAACAATATGCGGATCGAGAAGAAACGAAAGAGTGATGATGCCAGAATTACAAGGGAAGTTGAAGCCCATGAGATGAAGATCCGAAAAGAGCATGAGAAACAAGATAACCTTAGACGAAAGAGTGAAGAGCGAATGAAGAAAGAGATGGAGAGACAAGATCGTGAAAGGAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAACGTGAAGAGGAAAGAACAAAACGTGAGCAAAAACGTGAAATTGAACGAAGGGAAAAGCATTTGCTGAAGGAAAATTTAAGAGCTGAGAAATTGAGGCAAAAAGAAGAGCTTCGCAAAGAAAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAACTGCCCGTAGAATGGCTAAGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCTGCCTCAAGCAAGGGGTTTTCCTCTATTATACGTCTTGATTTTGATACTTTGCAAAACCTTGAATCATATAAGGATTCATTGTGTGTTCTCCCACCCAAGAGTGTAAAGCTAAGAAAACCATTTGCTATACAACCCTGGATCAACTCTGAAGAGAATGTTGGTAACCTGCTCATGGTTTGGAGATTTTTGATTACTTTTGCTGATGTTCTGGAGTTATGGCCTTTTACTCTCGATGAGTTTATGCAAGCATTTCACGACAATGATTCAAGACTGTTGGGTGAGATACATGTTGCTCTTCTTAAAGTGATAATAAAAGACATTGAGGATGTTGCAAGGACACCTTCTACAGGATTAGGAATGAATCAGAATGGTGCTGTTAATTCTGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGGTTTGACATACGAAATTGGCATAAGCACTTAAATCAGTTGACATGGCCGGAAATCTTCCGACAGCTAGCATTATCTGCAGGATATGGACCACAGTTGAAGAAAAGAAGTGTTACATGGTCCTATGAAAAAGATAAAGACGAGGGCAGAAGTTGCGAAGATATCATTTCTACACTTCGTAATGGTTCAGCAGCCGAAAATGCAGTTGCAAAAATGCAGGAGAAAGGGCTATTAGCACCTCGAAGATCTAGGCATAGGTTAACTCCTGGAACAGTTAAGTTTGCAGCATTTCATGTTCTCTCGCTTGAGGGTAGCAAGGGATTGACAGTACTAGAGCTCGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAGGCATCCATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAATAGCTCCATCAACGTATCGTGTTCGTTCTGCATTTAGAAAAGATCCTGCTGATGCTGAGTCCATTCTGTCTGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCAAGCTGGGGAAGATGCTGATGATGTTGCAAGAGAAGAAGAGTCTGAAAGTGACGAAGTTGATGAGGATCCTGAAGTTGATGACTTGGTAAATCCTTCAATTGCAAAAAAAACATCTGAACTGTGTGATGATTTATCATCAAATGGAAAAGAAAATTTGGTTAATGATGTAGAACTTCAAGATGAGTTTGATAAGGATATGCCTTGTTTTCCTGAGAATGGTTCAAAGAATACCGATTGTGCAAGTACTGCCACTGGACAACCTGTTGCTTGTGAAGATCTGAATGCTGGAAATCTTGGTGAAGATAATACGGAAATTGATGAAAGCAAGTCTGGAGAATCATGGGTTAAAGGGCTTGCAGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGTGTTGGTTGGTGTGGCAAACGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCATCAAATGCACTGAAGAAGCAAATGTGGGCAGAAGCACAGACAGACAAAGTTCGTCTGAAAGATGATATTTTTAATAAATTAGATTTTGCATCTATGGGTGGCAATAAAGTTGAAACACAAGACACATGTCCTATTGTGGAGGGCCACCAAAGTCCATTGCTTGACATTAATATTGACGCTGATAATAATGAGGCATCACCCAGCACTGCAGAAAATCAAAAAGCAGCTCCTGTTGCACAGAGCCTGTCTGTTGAAAGGCCCTCTTCAGTTCAAGATCTCTGTACAGGTCCAGATAACCCTCAGGCTCAGCTATCTGCACAATATTCAAAAAGGTCACGATCCCAGTTGAAATCTTATATTTCCCACATAGCGGAGGAGACGTTTGTCTACAGATCCTTACCCCTTGGCCAAGATCGCCGACGTAATCGATATTGGCAATTTGTTGCATCTGCTTCTTGCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATATCATGATGGAAATTGGAGGCTTATTGATTCTGAAGAGGCCTTCAATGCACTTTTGAATTCACTGGATTCACGTGGGATGAGGGAATCTCATTTGCGTTTGATGTTGCTGAAGATTGAAAATCCGTTTAAGGAAAATGTTCGAAAGAACACACTTAGCAACAAAATTGGAAGCAGAGATGAAGCTGATGAAACTGATTCCAGTCCTGATCTCCAGACTGGAACTGACACTCCTAGCAGTACTCTTTGTGGCTTGAACTCTGATGTTTCAGAAACTTCATCATCCTTCAAAATTGAGCTCGGGAAAAGTGAGAGCGAGAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTCCAAAAATGGATGTGGAAAGAATGCTACTGCTCATCAATATTATGTGCAATGAAACATGGGAGAAAGAGAGGCAGCCCTCAGGTTGACATCTGTGATATCTGTCTCAACCCTTATTTCTTTGAAGACTCTCATTGCAATTGTTGCCACCGCACTTTTCCCTCAAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGAGACAAGTTATCCAAAGATATTAGTAATTTAGATTCTTCTCTTCCCTTGCGGACAAGATTGTTTAAGGCTCTTCTTGCTTTTATTGAGGCATTTGTTCCACCTGAAGCATTTCAATCAATTTGGAAAGAAGATATTAGGAGGCATTGGGGTCTGAAGTTAAGCAAATCATCTTCTGCTGATGAACTTCTACAGATATTGACCCTACTTGAGAGAGCATTAAAGCGAGATTTTTTATCATCAACCTTCACTACAACAGAGGAACTGTTGCGGTCGAGCAGTATGTCAGAGAGTGCTGCACATACTTCTACTAATCCTGAATCAGTTGCTACACTTCCATGGGTTCCACAGACTACTGCAGCTGTGTTTCTTAGACTTTTTGAGTTGGATGGATCCATAATCTATGTACCGCGTGAGAAAACTGAGCTTCGTGAGGAGAAAGACTCTAGGGAGTGCATAAAGCTTCCTTCAAGATATAATCCCTCCAAATCTAGTAAAGTGGTTGAACCAGAACCAGCAGATTCGGACCATGATGATTTCATGAAAGTTAAATCTGCTCCTATGAAAATTGCACGGAGCAGCAATAAACGTGGACGAGGGAGTCATGATAAAGGACGGGGTAAAAAGCTATCTAAAAGAATGAGGGATTCTAAACGAGATACCAGCCGCAATGTTAAGGTCACTGAGAATCTAAGTCAGAGAATTAAACAGCAGGGACGAGGATCACAAGGACAAGCTGGTGGACGTGGTCGCCGGACAGTGAGGAAAAGGAGAGTGGAAAAAAGGGCTGTTGAAGATTTGTTGCTGGGCCATGGGGCTGCCTCTCATAGCTCCAGTATCGGTAGGGAACCATTGAGAAGCTTGGATGAGGATTGGGATGATAGAAAGGCAAGTCCCATGACTCCCATCCACATGGGGGCTGCCGACATCAGTAACAGTGCTGAAGAGGCTGAATCTGGTGATAATGCTCAAGCAGTGGAATCTGGTGATAATGCTCAAGCAGTGGAATCTGGTGATAATGCTCAAGCAGTGGAATCTGATGACAATGATGAAGCAGTGGAATATGATCAAGGAAACTGGGAGATTGGTTTTAGCGGTACCCCCAACAGATGGAGTAGGCATTTGGTTAATATGAGTGATGAAGATGTGGAAGCTTCTGAAGATGACAATGACAATGGCATTGAAGAGGAGGATTCAGAGGCAGATGTTATGAGCGAGGGTTCAGATGGTATGGCTAATGGAGTTGTAAATGGAGCAGGCTCAGACTCGGCTGATTCTGAAGATTAG | 5331 | 0.4373 | MEGEAGSEGHNRGGADDNSNDNNGSNSKIANSNEGQSKPKRQMKTPFQLQNLEKAYALDTYPSEAMRLELSEKLGLSDRQLQTWFCHRRLKDKKDLPPRKRPRKVAAEPLPDSDLPPKKRPRKVAAELLPDSPTDDMRLDPELGNEYGSGSGSGSSPLTRSESRNAMPQGLPGYYESPQAGMESRAIASVEAQLGEPLREDGPILGVEFDPLPPDAFGAPIVTEQRKRPSLAYDSKIYDRHDMRANKALARTFHEYQFLPNQSGIRTDAFGQFSQPHLHDPMEGPARNPPFVLGNEQPPRIHATKGHSSRSQQDKQGIPYQSPPGDKDDAPQTELYTNIANIGMNSHFTDHQIVGPESPSALPSGQVLPNNMRIEKKRKSDDARITREVEAHEMKIRKEHEKQDNLRRKSEERMKKEMERQDRERRKEEERLMRERQREEERTKREQKREIERREKHLLKENLRAEKLRQKEELRKEKEAERRKAALEKATARRMAKESMELIEDEQLELMELAASSKGFSSIIRLDFDTLQNLESYKDSLCVLPPKSVKLRKPFAIQPWINSEENVGNLLMVWRFLITFADVLELWPFTLDEFMQAFHDNDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGMNQNGAVNSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALSAGYGPQLKKRSVTWSYEKDKDEGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRSAFRKDPADAESILSEARKKIQIFENGFQAGEDADDVAREEESESDEVDEDPEVDDLVNPSIAKKTSELCDDLSSNGKENLVNDVELQDEFDKDMPCFPENGSKNTDCASTATGQPVACEDLNAGNLGEDNTEIDESKSGESWVKGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEASNALKKQMWAEAQTDKVRLKDDIFNKLDFASMGGNKVETQDTCPIVEGHQSPLLDINIDADNNEASPSTAENQKAAPVAQSLSVERPSSVQDLCTGPDNPQAQLSAQYSKRSRSQLKSYISHIAEETFVYRSLPLGQDRRRNRYWQFVASASCNDPGSGRIFVEYHDGNWRLIDSEEAFNALLNSLDSRGMRESHLRLMLLKIENPFKENVRKNTLSNKIGSRDEADETDSSPDLQTGTDTPSSTLCGLNSDVSETSSSFKIELGKSESEKKAALRRYQDFQKWMWKECYCSSILCAMKHGRKRGSPQVDICDICLNPYFFEDSHCNCCHRTFPSNNGFNFSKHAFQCGDKLSKDISNLDSSLPLRTRLFKALLAFIEAFVPPEAFQSIWKEDIRRHWGLKLSKSSSADELLQILTLLERALKRDFLSSTFTTTEELLRSSSMSESAAHTSTNPESVATLPWVPQTTAAVFLRLFELDGSIIYVPREKTELREEKDSRECIKLPSRYNPSKSSKVVEPEPADSDHDDFMKVKSAPMKIARSSNKRGRGSHDKGRGKKLSKRMRDSKRDTSRNVKVTENLSQRIKQQGRGSQGQAGGRGRRTVRKRRVEKRAVEDLLLGHGAASHSSSIGREPLRSLDEDWDDRKASPMTPIHMGAADISNSAEEAESGDNAQAVESGDNAQAVESGDNAQAVESDDNDEAVEYDQGNWEIGFSGTPNRWSRHLVNMSDEDVEASEDDNDNGIEEEDSEADVMSEGSDGMANGVVNGAGSDSADSED | 1776 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1517 | 1533 | - | - | |
Gabi4373g00003 | 1776 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 952 | 995 | IPR028942 | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1663 | 1690 | - | - | |
Gabi4373g00003 | 1776 | Gene3D | - | 21 | 96 | - | - | |
Gabi4373g00003 | 1776 | Coils | Coil | 389 | 457 | - | - | |
Gabi4373g00003 | 1776 | PANTHER | HOMEOBOX-DDT DOMAIN PROTEIN RLT2 | 20 | 1768 | IPR044977 | GO:0006357 | |
Gabi4373g00003 | 1776 | Coils | Coil | 460 | 491 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1061 | 1078 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 148 | 166 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1730 | 1752 | - | - | |
Gabi4373g00003 | 1776 | SUPERFAMILY | Homeodomain-like | 25 | 94 | IPR009057 | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 349 | 449 | - | - | |
Gabi4373g00003 | 1776 | ProSiteProfiles | HARE-type HTH domain profile. | 746 | 815 | IPR007759 | GO:0006355 | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1574 | 1592 | - | - | |
Gabi4373g00003 | 1776 | Pfam | HB1, ASXL, restriction endonuclease HTH domain | 746 | 814 | IPR007759 | GO:0006355 | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 372 | 449 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1547 | 1561 | - | - | |
Gabi4373g00003 | 1776 | SMART | HOX_1 | 37 | 99 | IPR001356 | GO:0003677 | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 87 | 211 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1059 | 1078 | - | - | |
Gabi4373g00003 | 1776 | Pfam | Williams-Beuren syndrome DDT (WSD), D-TOX E motif | 1131 | 1203 | IPR028941 | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Gabi4373g00003 | 1776 | ProSiteProfiles | DDT domain profile. | 564 | 623 | IPR018501 | - | |
Gabi4373g00003 | 1776 | ProSitePatterns | 'Homeobox' domain signature. | 70 | 93 | IPR017970 | GO:0000981|GO:0006355 | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 272 | 334 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 843 | 867 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1214 | 1252 | - | - | |
Gabi4373g00003 | 1776 | CDD | homeodomain | 40 | 94 | IPR001356 | GO:0003677 | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1631 | 1646 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 99 | 126 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 848 | 867 | - | - | |
Gabi4373g00003 | 1776 | Pfam | DDT domain | 565 | 620 | IPR018501 | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 302 | 319 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1232 | 1252 | - | - | |
Gabi4373g00003 | 1776 | SMART | testlast3 | 564 | 623 | IPR018501 | - | |
Gabi4373g00003 | 1776 | ProSiteProfiles | 'Homeobox' domain profile. | 35 | 95 | IPR001356 | GO:0003677 | |
Gabi4373g00003 | 1776 | Pfam | Homeodomain | 38 | 94 | IPR001356 | GO:0003677 | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 1493 | 1776 | - | - | |
Gabi4373g00003 | 1776 | MobiDBLite | consensus disorder prediction | 16 | 47 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4373g00003 | Gabi-Chr4373 | 11636 | 21857 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4373g00003 | 30 | 1717 | Homeobox Transcription Factor Family | AT1G28420 | 48.065 | 0.0 | 1292 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-other | Gabi4373g00003 | WSD | 3.9e-14 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4373g00003 | - | - | gmx:100818817 | 2444.08 |