Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi436g00005 ATGTCCACAACTTTGGATTCTAATCCCACTGTAGTTGATGAGTGTCGTGGTGTCCTTCATGTGTATAGTGATGGCTCCATTGTACGCTCTTCAAAGCCAGGCTTCAACGTCCCGGTTGAAGACGACGGCACCGTTTTGTGGAAAGATGTCGTTTTTGACTCTGCCCATGATCTTCAGCTTCGGCTCTATAAGCCAGCCGATTCATCTGGCTCCAAGCTTCCCGTTTTCTTCTATATCCATGGCGGCGGCTTCTGCATCGGCTCCCGCACATGGCCTAACTGTCAAAACTACTGCTTCCGGCTGGCTTCTGAGCTTCGAGCCGTGGTTGTCGCCCCAGATTATCGGCTGGCTCCAGAGAACCGCCTCCCGGCTGCAATTGACGATGGTTTTATGGCTCTCAGGTGGCTTCAAGCCCAAGCTGTGAGCCATGAGCCCGATCCCTGGTTGAGCCATGTGGCTGATTTCAGCCGGGTGTTTGTTTCGGGTGACTCGGCTGGTGGAAACATAGCTCATAATTTGGCGGCTGGGCTCGGATATGGGTCACCTGAGTTGGCACCAGTTCGGGTCAGGGGTTATGTTCTATTGGCACCTTTCTTTGGTGGAACTATCCAAACAAAGTCAGAAGTTGAAGGACCAAAAGATGCTTTTCTCAATTTAGAACTTATTGATAGGTATTGGAGGCTTTCTATACCTGTTGGGGACACTACTGATCACCCACTTGTGAATCCATTTGGACCAGTTAGCAAGAGCCTTGAAGCAATTGATCTTGACCCAATTCTAGTGGTGGTTGGAGGAATTGATTTGCTTAAAGACAGGGCAGAGGATTATGCAAGGAGGCTTAAGAATTGGGGCAAAGATATAGAGTATGTTGAATTTGAAGGACAACCACATGGTTTCTTTACTATTGATCCCAACTCAGAACCATCGAACAAGTTGATGTTGATCATCAAACAATTCATAGAGAAACATTTGGGCTAA 978 0.4785 MSTTLDSNPTVVDECRGVLHVYSDGSIVRSSKPGFNVPVEDDGTVLWKDVVFDSAHDLQLRLYKPADSSGSKLPVFFYIHGGGFCIGSRTWPNCQNYCFRLASELRAVVVAPDYRLAPENRLPAAIDDGFMALRWLQAQAVSHEPDPWLSHVADFSRVFVSGDSAGGNIAHNLAAGLGYGSPELAPVRVRGYVLLAPFFGGTIQTKSEVEGPKDAFLNLELIDRYWRLSIPVGDTTDHPLVNPFGPVSKSLEAIDLDPILVVVGGIDLLKDRAEDYARRLKNWGKDIEYVEFEGQPHGFFTIDPNSEPSNKLMLIIKQFIEKHLG 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi436g00005 325 Coils Coil 266 286 - -
Gabi436g00005 325 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Gabi436g00005 325 Gene3D alpha/beta hydrolase 19 324 IPR029058 -
Gabi436g00005 325 PANTHER ARYLACETAMIDE DEACETYLASE 15 304 - -
Gabi436g00005 325 SUPERFAMILY alpha/beta-Hydrolases 9 324 IPR029058 -
Gabi436g00005 325 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi436g00005 Gabi-Chr436 61588 63092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi436g00005 11 271 Carbohydrate Esterase AT1G68620 40.449 1.07e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi436g00005 - - aprc:113858789 577.785