Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4359g00006 ATGGGGAGGAAGGGAAATTGGTTTTCTACAGTGAAGAAAGCTCTCAGCCCTGACTCAAAGGAGAGGAAAGATCAGAAATCAAGTAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCTGAGTCATACTCAGAAAATGATAAAGCACCTCCTCTTCCTCCACCAGAAGAGATTAAATTAACTGATCTAGAAAATGAAATCAGTCATGATCATGTTGTTGAAGTTGCAATTGCCACAAATGCTGAAGAACCTGTTCCTACTGTTCGGACAGCAGCCGTTAGGGTTGAAGCTGCCAGAATTGCTCGGTTTTCAGGTAAACCAAAGGATGAAGTGGCAGCAATCAAGATTCAAACAGCTTTTAGGGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGAGGGCTGGTCAGGTTGAAATCATTGATGGAAGGGCCCATTGTAAAACGCCAAGCCACAAGTACCCTCCGCTCTATGCAGACATTAGCTCGTGTGCAATCCCAGATTCGTTCTAGGAGGATCAGAATGTTAGAGGAGAATCAGACTCTGCAAAGACAACTCTTACAGAAGCATGCAAGAGAGCTTGAGAGCATGCGGATTGGGGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTAAGCAAGTATGAGGCTACTATGAGAAGAGAAAGAGCACTGGCTTATGCCTTCACTCATCAGCAAAACTGGAAGAACTCATCTAGATCTATAAATCCAATGTTCATGGATCCAACCATTCCTACATGGGGTTGGAGTTGGTTAGAAAGATGGATGGCAGCCCGGCCTTGGGAGAGCCGTAGCCTGATGGATAAAGAGCTGAATGACCATTCATCTATAAAAAGTTCAAGCCGCAGCATTACTGGTGGAGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCATTCTCCAACAGCCAGCCAAAATCCCGGCTCGCCTAGCTTACAGTCCCATTCAACTCCTTCCAAGCTAGCTTCTACAGCAGTTGCTAAGAAACTGAAGAAGGCAAGCCCAAAGGGCAGCTGGGTTATGGATGATGACTCAAAAAGCATGGTCAGTGTACAGTCAGATCGGTTCCGGAGGCACTCCATTGCTGGGTCATCAGTGAGAGATGATGAGAGCCTTGCTAGCTCTCCAGCAGTTCCAAGTTACATGGTGCCAACTCAGTCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCAACAGAAAATGGGAAAACAGAGAAGGGGTCCTTTGGGACTGCAAAGAAGCGTCTTTCTTTCCCAGCTTCACCTGCAAGACCAAGGCGTCATTCAGGTCCACCAAAGGTTGAAAGCAGCATAAATGCAGAGTTCACAGTGGACAATGGTGTGGCCAATTGA 1416 0.4562 MGRKGNWFSTVKKALSPDSKERKDQKSSKSKKKWFGKQKLQTSESYSENDKAPPLPPPEEIKLTDLENEISHDHVVEVAIATNAEEPVPTVRTAAVRVEAARIARFSGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPIVKRQATSTLRSMQTLARVQSQIRSRRIRMLEENQTLQRQLLQKHARELESMRIGEEWDDSLQSKEQIEAKLLSKYEATMRRERALAYAFTHQQNWKNSSRSINPMFMDPTIPTWGWSWLERWMAARPWESRSLMDKELNDHSSIKSSSRSITGGEISKSFARFQLNSEKHSPTASQNPGSPSLQSHSTPSKLASTAVAKKLKKASPKGSWVMDDDSKSMVSVQSDRFRRHSIAGSSVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLATENGKTEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSINAEFTVDNGVAN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4359g00006 471 MobiDBLite consensus disorder prediction 316 343 - -
Gabi4359g00006 471 MobiDBLite consensus disorder prediction 316 471 - -
Gabi4359g00006 471 MobiDBLite consensus disorder prediction 398 427 - -
Gabi4359g00006 471 Gene3D - 89 140 - -
Gabi4359g00006 471 PANTHER IQ-DOMAIN 5-RELATED 1 452 - -
Gabi4359g00006 471 MobiDBLite consensus disorder prediction 1 59 - -
Gabi4359g00006 471 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gabi4359g00006 471 SMART iq_5 111 133 IPR000048 GO:0005515
Gabi4359g00006 471 Pfam Protein of unknown function (DUF4005) 384 450 IPR025064 -
Gabi4359g00006 471 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4359g00006 Gabi-Chr4359 52844 58272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4359g00006 1 470 IQD Protein Family AT5G03040 52.449 4.07e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4359g00006 - - gmx:100800080 731.865