Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4355g00009 ATGGAAAAGGAGCTTGGCGAGATGTTGTATAGCTTTGGCAAGATGGTTTATCAGCACTTTGCGTATCTGGGTAGTTTAAGAGAGACTGAGGGGTACTTGCAAAGGCACTCTGACGCTCAAATCAGTTCAGTATTCAAGGAGGTTCAAGATGGCCTTTCTCTGGCTATTCCTCGGTGGGCAAGCCTATGTTCAATAGTTGATTTAGTAGATATCGTGGCAAGTAGAAGTTGTCATTCATTCAATGGTTCCTTTCAGGTTAAGTCACGTTTGAACTGCTATGTAAATTCTATAACCAAGAAGGTGGCCTCCATCACTGCTCAAAAGCGTACAAATTCGACATTGGAGAGTGGATTTTCGTTCAAAAACGGCGTAGTAACAGGTAGTGGACAGGTTTATCTCGGAAGAGCATGGGGAGAATATTCCAGAGTTGTTTACTCTTACACCTACTTGGACACAATAGTTCACCCCAAAGGATGGAGTGATTGGGGTGACAAAAAACGTGACTTGAGGGTATATTATGGAGAATACAAGTGTAGTGGGCCAGGGGCTAACTTGACTGGAAGAGTGCCCTGGGCAAGAATGCTAACGGATGAAGATGCCAAGCCTTTTATTGGGATTCACTTCATTGAAGGGGACACTTGGCTCATTAGTCCCTTCGCCTATCCAATTTAA 672 0.439 MEKELGEMLYSFGKMVYQHFAYLGSLRETEGYLQRHSDAQISSVFKEVQDGLSLAIPRWASLCSIVDLVDIVASRSCHSFNGSFQVKSRLNCYVNSITKKVASITAQKRTNSTLESGFSFKNGVVTGSGQVYLGRAWGEYSRVVYSYTYLDTIVHPKGWSDWGDKKRDLRVYYGEYKCSGPGANLTGRVPWARMLTDEDAKPFIGIHFIEGDTWLISPFAYPI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4355g00009 223 Pfam Pectinesterase 95 212 IPR000070 GO:0030599|GO:0042545
Gabi4355g00009 223 Gene3D - 45 220 IPR012334 -
Gabi4355g00009 223 SUPERFAMILY Pectin lyase-like 95 215 IPR011050 -
Gabi4355g00009 223 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4355g00009 Gabi-Chr4355 101359 109717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4355g00009 103 215 Carbohydrate Esterase AT1G05310 43.363 2.46e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4355g00009 K01051 - gmx:100778999 229.565