Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4331g00007 ATGAGGAAACAACAGCAACAAACTCAGCAATCAGAGTCTTTGAACTGCCCAAGATGTGACTCTACAAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGTAAGAGGCACTGGATTAAAGGCGGAACTTTACGCAATGTTCCTGTTGGTGGTGGCAGGAAGAATAAGAGGGTAAAAAAATCAACCACCCCAACATCTTCCTCCACCACCAAAGCCACCTCCCCCTCTACTTGCACCACCACTGTCTCCACCTCAATTGGCAACATGGGTGGCGGGTCAAGTAGCCACATGACAATGAATCCAACTCCTCTTATAGTGAGTAATCAGAAAAGCATCCCTTCCTCTTTCTATCAAGTTCAAGCTTTGATTCGTCCACCATCTTTGCTGCTACAACAGAATCTGATGAATACTGGAGACTTAGAAAGCAAAGATTTTGGTATTGGTAATAGCATCTTTCTGAGTTCAACTTTGCCTCTTCCTCAAAACCAAAGCCTACACTTTCCCTTCTCAACCTCAAGATCTTTTGACACAAACCCTTGTGCAGTATCAACTTCTCTGCGATCCTCCAATGTTTATAACTATGGGGAGGAGTTTAAAACATTGGAGGAACCAACCATCAACAGCATAATGCCCAACACAAGTCGCAGTAACACACAGCCATGGGAGATACCAGCAACAAGTGCTAGCATGGAAACTTCAAACTATTGGAATTGGGAGGACATTGATTCTTTGGTCTCAACTGATCTGAAAGATCCCTGGGATGATTCTGATATCAAACCATGA 813 0.4342 MRKQQQQTQQSESLNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWIKGGTLRNVPVGGGRKNKRVKKSTTPTSSSTTKATSPSTCTTTVSTSIGNMGGGSSSHMTMNPTPLIVSNQKSIPSSFYQVQALIRPPSLLLQQNLMNTGDLESKDFGIGNSIFLSSTLPLPQNQSLHFPFSTSRSFDTNPCAVSTSLRSSNVYNYGEEFKTLEEPTINSIMPNTSRSNTQPWEIPATSASMETSNYWNWEDIDSLVSTDLKDPWDDSDIKP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4331g00007 270 Pfam Dof domain, zinc finger 13 66 IPR003851 GO:0003677|GO:0006355
Gabi4331g00007 270 MobiDBLite consensus disorder prediction 54 91 - -
Gabi4331g00007 270 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 181 IPR045174 GO:0003700|GO:0006355
Gabi4331g00007 270 MobiDBLite consensus disorder prediction 71 91 - -
Gabi4331g00007 270 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4331g00007 Gabi-Chr4331 105980 106813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4331g00007 1 84 C2C2-Dof Transcription Factor Family AT5G60850 62.791 2.53e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi4331g00007 zf-Dof 1.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4331g00007 - - gmx:778119 333.183