Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4328g00003 ATGGCATCAAGTTCAATGTCATCATCTGGCTCATGGAGTGCTAAGGACAATAAAGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGGTGGTACAATGTTGCTCGCGCCGTTGGCGGGAAATCTCCGGAGGAAGTTAAGAGGCACTATGAGCTCCTCGTCCGGGATGTTATGCACATTGAATCAGGGCAAGTGCCATTCCCAAACTACAAGAAAAAATGA 234 0.4829 MASSSMSSSGSWSAKDNKAFERALAVYDKDTPDRWYNVARAVGGKSPEEVKRHYELLVRDVMHIESGQVPFPNYKKK 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4328g00003 77 SMART sant 8 60 IPR001005 -
Gabi4328g00003 77 CDD SANT 18 58 IPR001005 -
Gabi4328g00003 77 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 76 IPR044636 GO:0003700
Gabi4328g00003 77 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Gabi4328g00003 77 ProSiteProfiles SANT domain profile. 7 61 IPR017884 -
Gabi4328g00003 77 FunFam Transcription factor SRM1 4 71 - -
Gabi4328g00003 77 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Gabi4328g00003 77 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Gabi4328g00003 77 Gene3D - 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4328g00003 Gabi-Chr4328 47319 47617 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4328g00003 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4328g00003 - - gmx:100818368 140.198