Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4327g00001 ATGGAGCAGATCATAAGCTTTGGTGAAGATGGGAACATCAAATTGCCTGTTGGGTATAGCTTTGACCCCGCAGATGATCATCTTGTCAATTACTACTTGAAGAGGAAGGTCTTTGATCAACCATTCCCTGTTGAAATCATTCATGAGTTTGATGTTTTTCAGAGTGAGCCATGGGGACTCCCAGGAGGTGGAAAGGCTTTCAATGATCACAAGTTTTTCTTCTACTACACCAAGGGGAATGTGAATGGAAACAAAGACAAGAGAGCTGCAGGATCTGGCCTTTGGAGAGCAGTGGGGAAAGCCAAATACATTGTACTCTCTGGGAGCAAAGAGCTGATTGGGAAGAGGAACACACTGATTTTCTGGGAAGGGAAAGGAAACAAGCCTATCAAAACAAAATGGGCTATGCATGAGTTCCGCCTTGAATCACTTGCTAATCCATATCAGGTGTCAAATTGGGCTGTGTATCACATATTTGAGAAGAAGGATGCTGAAAAGGCAAAGAAGGGGAATGGAGACAATGGGGAGCCCTCTAACAATGCTGAAGTTGAGAAACCAAGTGTCATGGATTTCACTGAGGAGAGTGGGAGTGACTTTGTCCCTCCTTCTTCACCTCTTTCCCCATGA 627 0.445 MEQIISFGEDGNIKLPVGYSFDPADDHLVNYYLKRKVFDQPFPVEIIHEFDVFQSEPWGLPGGGKAFNDHKFFFYYTKGNVNGNKDKRAAGSGLWRAVGKAKYIVLSGSKELIGKRNTLIFWEGKGNKPIKTKWAMHEFRLESLANPYQVSNWAVYHIFEKKDAEKAKKGNGDNGEPSNNAEVEKPSVMDFTEESGSDFVPPSSPLSP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4327g00001 208 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Gabi4327g00001 208 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Gabi4327g00001 208 SUPERFAMILY NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Gabi4327g00001 208 Gene3D NAC domain 24 166 IPR036093 GO:0003677|GO:0006355
Gabi4327g00001 208 PANTHER NAC TRANSCRIPTION FACTOR 56 15 175 - -
Gabi4327g00001 208 MobiDBLite consensus disorder prediction 166 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4327g00001 Gabi-Chr4327 28943 30226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4327g00001 5 164 NAC Transcription Factor Family AT5G13180 39.877 3.04e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4327g00001 NAM 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4327g00001 - - lja:Lj6g3v0227250.1 189.504