Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00081 ATGTATCCTAGACTGATACACCCCCATGAAGGGATTGTGGGACAGGAAGATATGCAGAGTGGTTGTGCCCCTAACCTCTCTCACAATCATAAGGGTGACCCATGTCTCGTTTTGACGGCTGATCCCAAACCTCGCCTTCGGTGGACTCAGGACCTCCATGAACGATTTGTTGATGCAGTCACCCAACTTGGGGGTGCCAGTAAAGCAACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTAAAGAGTCATCTGCAGAAATTTAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTAGTACTGATAACTCTTCTCCAAAATTGCCAACTTCTGATACAAACGAGGGTTATGAAATCAAGGAGGCGTTAAGAGCACAGATGGAAGTGCAAAGTAAACTGCATTTGCAAGTGGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCGGAGCGGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATTGGTGCTACAGTTATAGACACAGACAACCAAAAGTTTCAAGGAAATGGAAGTAAAGCACCAAGAGGTCCCTTGATTGATCCTCTTGGTTTTTACTCCTTGCCATCTGCTGAGGTTGCTGGATTGAATGTCCCAGAAGAAGAAATACCACCCAGTTTCCCACCCCAAAGGGCCGATTGTTCAACTGAAAGTTGTTTAACCTCACATGAGGGTTCAGGAGGATTGACTTTAGAAGGATCTCCAGCTGGGGGTAAAAGGAGGATGCTGGGCATGGACTCTATGGCAGCACCTTTGATCTGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATCTAGCCCAAGGTAATCCTCATGGAATAACTAGGTATGGCATGTAG 942 0.4575 MYPRLIHPHEGIVGQEDMQSGCAPNLSHNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEGCKDGSYLLESPSTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDNQKFQGNGSKAPRGPLIDPLGFYSLPSAEVAGLNVPEEEIPPSFPPQRADCSTESCLTSHEGSGGLTLEGSPAGGKRRMLGMDSMAAPLIWSEAKMRTQAINLAQGNPHGITRYGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00081 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 22 261 IPR044848 GO:0003700
Gabi4319g00081 313 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Gabi4319g00081 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Gabi4319g00081 313 MobiDBLite consensus disorder prediction 100 133 - -
Gabi4319g00081 313 MobiDBLite consensus disorder prediction 245 262 - -
Gabi4319g00081 313 MobiDBLite consensus disorder prediction 116 132 - -
Gabi4319g00081 313 Gene3D - 42 100 - -
Gabi4319g00081 313 MobiDBLite consensus disorder prediction 239 276 - -
Gabi4319g00081 313 SUPERFAMILY Homeodomain-like 43 99 IPR009057 -
Gabi4319g00081 313 FunFam Myb family transcription factor 42 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00081 Gabi-Chr4319 757269 763513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00081 29 256 G2-like Transcription Factor Family AT3G24120 46.888 1.93e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4319g00081 Myb_CC_LHEQLE 2.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00081 - - gmx:100782369 574.704