Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00080 ATGTATCCTAGACTGATACACCCCCATGAAGGGATTGTGGGACAGGAAGATATGCAGAGTGGTTGTGCCCCTAACCTCTCTCACAATCATAAGGGTGACCCATGTCTCGTTTTGACGGCTGATCCCAAACCTCGCCTTCGGTGGACTCAGGACCTCCATGAACGATTTGTTGATGCAGTCACCCAACTTGGGGGTGCCAGTAAAGCAACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTAAAGAGTCATCTGCAGAAATTTAGACTTGGTAAGCAATCAGGGAAAGATATGGGTGAGGGATGCAAAGATGGAATATCAGGTTCATATCTTTTAGAAAGCCCTAGTACTGATAACTCTTCTCCAAAATTGCCAACTTCTGATACAAACGAGGGTTATGAAATCAAGGAGGCGTTAAGAGCACAGATGGAAGTGCAAAGTAAACTGCATTTGCAAGTGGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCGGAGCGGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATTGGTGCTACAGTTATAGACACAGACAACCAAAAGTTTCAAGGAAATGGAAGTAAAGCACCAAGAGGTCCCTTGATTGATCCTCTTGGTTTTTACTCCTTGCCATCTGCTGAGGTTGCTGGATTGAATGTCCCAGAAGAAGAAATACCACCCAGTTTCCCACCCCAAAGGGCCGATTGTTCAACTGAAAGTTGTTTAACCTCACATGAGGGTTCAGGAGGATTGACTTTAGAAGGATCTCCAGCTGGGGGTAAAAGGAGGATGCTGGGCATGGACTCTATGGCAGCACCTTTGATCTGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATCTAGCCCAAGGTAATCCTCATGGAATAACTAGGTATGGCATGTAG 951 0.4564 MYPRLIHPHEGIVGQEDMQSGCAPNLSHNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKFRLGKQSGKDMGEGCKDGISGSYLLESPSTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDNQKFQGNGSKAPRGPLIDPLGFYSLPSAEVAGLNVPEEEIPPSFPPQRADCSTESCLTSHEGSGGLTLEGSPAGGKRRMLGMDSMAAPLIWSEAKMRTQAINLAQGNPHGITRYGM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00080 316 MobiDBLite consensus disorder prediction 242 279 - -
Gabi4319g00080 316 MobiDBLite consensus disorder prediction 117 135 - -
Gabi4319g00080 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Gabi4319g00080 316 Gene3D - 42 100 - -
Gabi4319g00080 316 FunFam Myb family transcription factor 42 100 - -
Gabi4319g00080 316 MobiDBLite consensus disorder prediction 115 135 - -
Gabi4319g00080 316 SUPERFAMILY Homeodomain-like 43 99 IPR009057 -
Gabi4319g00080 316 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 22 264 IPR044848 GO:0003700
Gabi4319g00080 316 Pfam MYB-CC type transfactor, LHEQLE motif 141 186 IPR025756 -
Gabi4319g00080 316 MobiDBLite consensus disorder prediction 248 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00080 Gabi-Chr4319 757268 763513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00080 29 259 G2-like Transcription Factor Family AT3G24120 45.643 1.94e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4319g00080 Myb_CC_LHEQLE 2.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00080 - - gmx:100782369 569.311