LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi4319g00061	ATGATAAAAAAGGACTATACAAACCATAGCAGAAACCAAGTTGATGCAAACTTGGAGAACCAAACATTAGAGGACACAACTAGTATGTCATCATCATCAGAGGAAAAGGAGCATGGCTCTTTGCACTATGATTCCGATGAAGAAACCTCCAGTAGTTACGCTTGTTATGATTTCAATGGGTTCAATAAAAACCGAGTGTTAGATTATAGCCAAAACTACAGCACCACCGAGATAGAGAGTGAAGATTACAGCACCACCGAGATAGAAAGTGAAGATTACAGCCAAAACTACTACAGCACCAACGAGATAGAATATGACGATTCTGAGGATGAAAAATTTGAGACCAATCTTAAGGTGCCATTGGATCCAATACCAGAAGACTGCGAGACCAGTGTGTTCTCTTTCGATATTCAGAATGAGAAAAATGTTGTTCATGTGGCAGTGAACCCCGTTGGAGATTCAAGCATGGAAGCACTTTTATGGGTTCTGAACCATGCTGTCACACCCTCTACCACTGTCTGTCTCGTACACGTTTATCCTGAAATCAGATACATCTCAAGTCCACTTGGAAGAATGCCTAGAAACCAAGTGAATCCAGAGTATGTTAAGTTTCACTTGACCACAGAGCAAGCCAAGAAGAAAGAGCTCCTTCGAAGGTTCATTGACAAGTGTATTGATTCAAAGGTTAATGTGGAGATGATGCTTGTTGAGGGTGACAACGTTGCCAAAACCATCGTGGACGTTGTTTGGAATCGTTGTATAAGGAAATTGGTGATTGGAATTACCAACTCTAAATTAAGCAAATCTATATCTGGAACTGGAAAGGGAAATGCCATAGCAGATAAGGTCCTCAAGAATGTACCAGATGTATGTGATGTTAAAATAATATGTGACAGGAAGGAAGTGATTGATCAGATGATTGGTAGCACTTCATCAAGCCCCAGTGACAGTGTCAGTGGCAGTTCCAAAGTTTTAAAAAAACAAGATGAATCCCGTGGTTTTGTTCCTCTTATGCGTTTTGTAGCCAATCCTTTTGGGTCATTTAGACACAGAGTCAACAAGCTCTGA	1068	0.4054	MIKKDYTNHSRNQVDANLENQTLEDTTSMSSSSEEKEHGSLHYDSDEETSSSYACYDFNGFNKNRVLDYSQNYSTTEIESEDYSTTEIESEDYSQNYYSTNEIEYDDSEDEKFETNLKVPLDPIPEDCETSVFSFDIQNEKNVVHVAVNPVGDSSMEALLWVLNHAVTPSTTVCLVHVYPEIRYISSPLGRMPRNQVNPEYVKFHLTTEQAKKKELLRRFIDKCIDSKVNVEMMLVEGDNVAKTIVDVVWNRCIRKLVIGITNSKLSKSISGTGKGNAIADKVLKNVPDVCDVKIICDRKEVIDQMIGSTSSSPSDSVSGSSKVLKKQDESRGFVPLMRFVANPFGSFRHRVNKL	355

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi4319g00061	355	MobiDBLite	consensus disorder prediction	30	45	-	-
	Gabi4319g00061	355	MobiDBLite	consensus disorder prediction	1	47	-	-
	Gabi4319g00061	355	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	153	263	-	-
	Gabi4319g00061	355	Gene3D	HUPs	133	300	IPR014729	-
	Gabi4319g00061	355	MobiDBLite	consensus disorder prediction	11	29	-	-
	Gabi4319g00061	355	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	89	340	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi4319g00061	Gabi-Chr4319	550277	552119	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi4319g00061	144	321	U-box Gene Family	AT2G45910	25.946	1.80e-09	57.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi4319g00061	-		-	gmx:100818837	328.946