Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00060 ATGACAGCAACGTTAACTGAGACCTTGCAGTGCTTGCACCATTCATATGAAGGTGTGTCCATGGAAAACTACAGGTATGGCAGCACAAGCGTGAGTGAGATAGAGGAAGAGAACTCTTCACAGTCACAGTTATACTTACATGATGGTCCTTCTATGGGGACTATTAATGAAGACAACGAAGGTGAAGAAGACACTGTTTATGTAGCAGTTGGTAAGAGTGAAACTAGCATGGAAGCCCTCTCATGGACACTAAAAAACTTGGCTACTCCATCTACCATGGTCTATCTCATACATGTATTCCCAGAGATCAAGCACATTCCAAATCCATTGGGAGTGGGAATGGTTCCAAAGGACCAAGTGAGTCCTGAACAGGTGGAGAGCTATATGGCCCAAGAAAGAGGTAAGAGGAGAGAGCTCCTTCACAAGTTCCTCCAATCATGCTCTAATTCCAAGGTGGACACCATCCTGATTGAGAGTGATTTGATTGCTAAGGCTATCATCGACCTGATTCCCATACTTCAAATAAGAAAACTAGTGATTGGAGCCAACAAATCCCAATTAAGAAAATTAAGATCAGGGAAAGGGAATGGCATAGCTGATCAGATACTTCAGAATGCACCACAAAGTTGCAAGGTGAGAATTGTATGTGAAGGGAAGGAAGTAAATGAAAAGATAACTCATGCCATTGCTAATGATACTTCCTTGTCCCTGAAAGAAGAAGATCTGCAAAATGATTCAGTTTCATGTGTTTGTTTTAACTTTTAA 765 0.4144 MTATLTETLQCLHHSYEGVSMENYRYGSTSVSEIEEENSSQSQLYLHDGPSMGTINEDNEGEEDTVYVAVGKSETSMEALSWTLKNLATPSTMVYLIHVFPEIKHIPNPLGVGMVPKDQVSPEQVESYMAQERGKRRELLHKFLQSCSNSKVDTILIESDLIAKAIIDLIPILQIRKLVIGANKSQLRKLRSGKGNGIADQILQNAPQSCKVRIVCEGKEVNEKITHAIANDTSLSLKEEDLQNDSVSCVCFNF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00060 254 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 253 - -
Gabi4319g00060 254 Gene3D HUPs 64 232 IPR014729 -
Gabi4319g00060 254 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00060 Gabi-Chr4319 536007 538039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00060 49 238 Plant U-box Gene Family AT5G57035 28.421 3.25e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00060 - - gmx:100781056 328.946