Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00059 ATGACAGCAACGTTAACTGAGACCTTGCAGTGCTTGCACCATTCATATGAAGGTGTGTCCATGGAAAACTACAGGTATGGCAGCACAAGCGTGAGTGAGATAGAGGAAGAGAACTCTTCACAGTCACAGTTATACTTACATGATGGTCCTTCTATGGGGACTATTAATGAAGACAACGAAGGTGAAGAAGACACTGTTTATGTAGCAGTTGGTAAGAGTGAAACTAGCATGGAAGCCCTCTCATGGACACTAAAAAACTTGGCTACTCCATCTACCATGGTCTATCTCATACATGTATTCCCAGAGATCAAGCACATTCCAAATCCATTGGGAGTGGGAATGGTTCCAAAGGACCAAGTGAGTCCTGAACAGGTGGAGAGCTATATGGCCCAAGAAAGAGGTAAGAGGAGAGAGCTCCTTCACAAGTTCCTCCAATCATGCTCTAATTCCAAGGTTCAGGTGGACACCATCCTGATTGAGAGTGATTTGATTGCTAAGGCTATCATCGACCTGATTCCCATACTTCAAATAAGAAAACTAGTGATTGGAGCCAACAAATCCCAATTAAGAAAATTAAGATCAGGGAAAGGGAATGGCATAGCTGATCAGATACTTCAGAATGCACCACAAAGTTGCAAGGTGAGAATTGTATGTGAAGGGAAGGAAGTAAATGAAAAGATAACTCATGCCATTGCTAATGATACTTCCTTGTCCCTGAAAGAAGAAGATCTGCAAAATGATTCAGTTTCATGTGTTTGTTTTAACTTTTAA 771 0.415 MTATLTETLQCLHHSYEGVSMENYRYGSTSVSEIEEENSSQSQLYLHDGPSMGTINEDNEGEEDTVYVAVGKSETSMEALSWTLKNLATPSTMVYLIHVFPEIKHIPNPLGVGMVPKDQVSPEQVESYMAQERGKRRELLHKFLQSCSNSKVQVDTILIESDLIAKAIIDLIPILQIRKLVIGANKSQLRKLRSGKGNGIADQILQNAPQSCKVRIVCEGKEVNEKITHAIANDTSLSLKEEDLQNDSVSCVCFNF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00059 256 CDD STK_N 65 220 - -
Gabi4319g00059 256 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 255 - -
Gabi4319g00059 256 Pfam Universal stress protein family 65 211 IPR006016 -
Gabi4319g00059 256 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 209 - -
Gabi4319g00059 256 Gene3D HUPs 58 229 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00059 Gabi-Chr4319 536007 538039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00059 49 240 Plant U-box Gene Family AT5G57035 28.125 1.38e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00059 - - gmx:100781056 335.88