Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00058 ATGACAGCAACGTTAACTGAGACCTTGCAGTGCTTGCACCATTCATATGAAGGTGTGTCCATGGAAAACTACAGGTATGGCAGCACAAGCGTGAGTGAGATAGAGGAAGAGAACTCTTCACAGTCACAGTTATACTTACATGATGGTCCTTCTATGGGGACTATTAATGAAGACAACGAAGGTGAAGAAGACACTGTTTATGTAGCAGTTGGTAAGAGTGAAACTAGCATGGAAGCCCTCTCATGGACACTAAAAAACTTGGCTACTCCATCTACCATGGTCTATCTCATACATGTATTCCCAGAGATCAAGCACATTCCAAATCCATTGGGAGTGGGAATGGTTCCAAAGGACCAAGTGAGTCCTGAACAGGTGGAGAGCTATATGGCCCAAGAAAGAGGTAAGAGGAGAGAGCTCCTTCACAAGTTCCTCCAATCATGCTCTAATTCCAAGGTTCAGGTGGACACCATCCTGATTGAGAGTGATTTGATTGCTAAGGCTATCATCGACCTGATTCCCATACTTCAAATAAGAAAACTAGTGATTGGAGCCAACAAATCCCAATTAAGAAAATTAAGATCAGGGAAAGGGAATGGCATAGCTGATCAGATACTTCAGAATGCACCACAAAGTTGCAAGATTGTATGCTGTAGCTCTACTGAAAAAGAGTAA 672 0.4271 MTATLTETLQCLHHSYEGVSMENYRYGSTSVSEIEEENSSQSQLYLHDGPSMGTINEDNEGEEDTVYVAVGKSETSMEALSWTLKNLATPSTMVYLIHVFPEIKHIPNPLGVGMVPKDQVSPEQVESYMAQERGKRRELLHKFLQSCSNSKVQVDTILIESDLIAKAIIDLIPILQIRKLVIGANKSQLRKLRSGKGNGIADQILQNAPQSCKIVCCSSTEKE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00058 223 Pfam Universal stress protein family 65 214 IPR006016 -
Gabi4319g00058 223 Gene3D HUPs 64 215 IPR014729 -
Gabi4319g00058 223 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 211 - -
Gabi4319g00058 223 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00058 Gabi-Chr4319 536007 538238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00058 49 217 Plant U-box Gene Family AT5G57035 29.412 3.33e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00058 - - gmx:100781056 287.73