Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00057 ATGACAGCAACGTTAACTGAGACCTTGCAGTGCTTGCACCATTCATATGAAGGTGTGTCCATGGAAAACTACAGGTATGGCAGCACAAGCGTGAGTGAGATAGAGGAAGAGAACTCTTCACAGTCACAGTTATACTTACATGATGGTCCTTCTATGGGGACTATTAATGAAGACAACGAAGGTGAAGAAGACACTGTTTATGTAGCAGTTGGTAAGAGTGAAACTAGCATGGAAGCCCTCTCATGGACACTAAAAAACTTGGCTACTCCATCTACCATGGTCTATCTCATACATGTATTCCCAGAGATCAAGCACATTCCAAATCCATTGGGAGTGGGAATGGTTCCAAAGGACCAAGTGAGTCCTGAACAGGTGGAGAGCTATATGGCCCAAGAAAGAGGTAAGAGGAGAGAGCTCCTTCACAAGTTCCTCCAATCATGCTCTAATTCCAAGGTTCAGGTGGACACCATCCTGATTGAGAGTGATTTGATTGCTAAGGCTATCATCGACCTGATTCCCATACTTCAAATAAGAAAACTAGTGATTGGAGCCAACAAATCCCAATTAAGAAAATTAAGATCAGGGAAAGGGAATGGCATAGCTGATCAGATACTTCAGAATGCACCACAAAGTTGCAAGATGTGA 645 0.431 MTATLTETLQCLHHSYEGVSMENYRYGSTSVSEIEEENSSQSQLYLHDGPSMGTINEDNEGEEDTVYVAVGKSETSMEALSWTLKNLATPSTMVYLIHVFPEIKHIPNPLGVGMVPKDQVSPEQVESYMAQERGKRRELLHKFLQSCSNSKVQVDTILIESDLIAKAIIDLIPILQIRKLVIGANKSQLRKLRSGKGNGIADQILQNAPQSCKM 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00057 214 Gene3D HUPs 64 212 IPR014729 -
Gabi4319g00057 214 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 213 - -
Gabi4319g00057 214 Pfam Universal stress protein family 65 211 IPR006016 -
Gabi4319g00057 214 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00057 Gabi-Chr4319 536007 538238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00057 49 214 Plant U-box Gene Family AT5G57035 28.313 7.10e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00057 - - gmx:100781056 286.96