Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00053 ATGTTGCCAAGTGCTAAACACAGTTCATCTCTTCACTTGGGGACTATAATGAGTGAACAGCTGGGGCTGCTAAAAGTCTTAGTTGTGCAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTGCTCAAACTAGGGAATCAGACCGCAAAGACCAAGGTCATTAATAGCTGTTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACTGAACCCTTGGGAGTTCTGAATTTGGAAGTATTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTCCTCAACCTTCAACCATTAGTGTCTGCAGCTAGATTGAGAGATATTTTAGGAGTCTCCTCTGGTGAGACAACTATAAGGAAGGTGATACCTGATGGTGAAAACTGTCTTGTCCGTGAAAGCAGTATCAATTGTGTTAATGGTGAGGTTGTGCAGAATGTTTGGTTAAAGCTTCGTGGAGTAGAGTCTGGGGAGATAGAATTGACGATCAAGTTGATCACACCTGTTGCTTCCTCAGTATAG 549 0.4226 MLPSAKHSSSLHLGTIMSEQLGLLKVLVVQGKRLVIRDFKSSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFLNLQPLVSAARLRDILGVSSGETTIRKVIPDGENCLVRESSINCVNGEVVQNVWLKLRGVESGEIELTIKLITPVASSV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00053 182 CDD C2_ArfGAP 21 166 - -
Gabi4319g00053 182 Gene3D C2 domain 19 180 IPR035892 -
Gabi4319g00053 182 ProSiteProfiles C2 domain profile. 5 119 IPR000008 -
Gabi4319g00053 182 PRINTS C2 domain signature 38 50 IPR000008 -
Gabi4319g00053 182 PRINTS C2 domain signature 62 75 IPR000008 -
Gabi4319g00053 182 PRINTS C2 domain signature 83 91 IPR000008 -
Gabi4319g00053 182 SMART C2_3c 23 118 IPR000008 -
Gabi4319g00053 182 Pfam C2 domain 23 114 IPR000008 -
Gabi4319g00053 182 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 19 175 IPR035892 -
Gabi4319g00053 182 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 20 176 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00053 Gabi-Chr4319 495598 499229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00053 17 175 C2H2 Transcription Factor Family AT4G05330 45.963 1.44e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00053 - - gmx:100779624 298.901