Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00035 ATGACATCCATACCTTCGAAAAATCTATGGATTCGAAAGCAACAGTGCCCTTGTGGAGATTGGAAGTGTTATATTACATATGAGGGTGATGCTGAGGAGGGTTCTGCAGCACCAGAATTGGTGAAGGCAGAAAAAGCATCATCTGGAGCTATGATTACCCCCTATGTTGGAATGGTGTTCAAGAGTGATGATGATGCTTTTGAGTATTATGGCAATTTTGCTAGGAAGAATGGGTTCTCTATTAGGAAAGAAAGATCTAGAATTAGCCCTCAGTTGGGCATTTACAAGCGTGACTTTGTTTGTTACCGGTCTGGATTTGCCCCGGTGAAGAAGAAGCCTAATGGAGAACACCATAGAGATAGGAAATCAGTGAGGTGTGGATGTGATGCAAAAATGTATTTGTCTAAGGAGGTTGTAGAAGGGGTTTCCCAATGGTTTGTTGTGCAGTTTAGTAATGTACACAATCATGAACTTTTGGAAGATGATCAAGTGCGCCTTCTTCCTGCTTATCGTAAAATTCATGAGGCTGATCAAGAACGTATACTCTTGCTTTCCAAAGCTGGGTTTCCAATACATCGGATAGTGAAAATGCTTGAGCTCGAAAAGGGGATTCAAGGTGGGCAGCTGCCTTTCTTGGAAAGGGATGTGAGGAACTTTGTTCAAAACCGTAAGAAGGTTGTCCAAGAGAATGAGGCATTGCTCTGTGAGAAAAGAGAAAATGATATATTGGAACTTCTTGAGGCATGCAAAATCATGAAAGAAGCAGATGATAACTTTGTGTATGATTTTACAGTGGATGAGAGTGATAAGGTTGAAAATATAGCTTGGTCATATGGTGACTCTGTTAATGCAAATGCTATGTTTGGTGATGTGGTTTATTTTGACACTACTTATCGATCAATCACATATGGATTGCTTTTTGGAGTGTGGTTTGGTATTGATAGCTATGGTAGAACCATTTTTTTTGGTTGTGTTTTATTGCAGGATGAAACACCCCAGTCCTTCTCATGGGCATTGCAGACTTTTGTCCGGTTCATGAGAGGAAGATGTCCACAAACAATTCTAACTGATCTAGACCCTGGGCTTAGAGATGCCATTAGAAGCGAATTTCCAGGAACTAAACATGTCATTCCTCAGTGGAATATTCTATACAAAGTACCCAGCTGGTTTTCTATTCCTCTCGGGTCTCGCTATGCAGAATTCAAATCCGAGTTCGATGCCTTATTTCACATTGAGAATACAGAGGAATTTGAACTTCAGTGGAGCCAAATGATTTCTGTGTTTGGGCTTGGTTCAGATAAACATACTGATTTACTGTATTCTGTTCGGGCATCCTGGGCACAACCCTATGTAAGAGGTTACTTTCTGGCTCGAATGGCGACAATAGCTTACTCGAAGTCTATAGATGCATTTTTGAAAGGAATATTCACTGCACATACATGTTTGCGTAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAATTTTCAACATCAAGCACATCAGGAGGCTCAATATATACATCTCAAAACTTGCATACCCATTGAAGAGCATGCACGAAGTATTCTCACGCCTTTTGCTTTTAATGCTTTGCAGCAAGAATTATTGCTTGTAATGCAATATGCTACTTCTGAGATGGCCAATGGATCATATATTGTACGGCACTTCAAAAGGATGGATGGGGAAAGGCTAGTAATATGGTTGGCTGAAGACGAACAGATACACTGCTCTTGCAAGGAATTTGAATCCTCAGGAATATTATGCAGACATGCTCTTCGTGTATTTGTAATAAAAAACTACTTTCAGCTCCCTGACAAATACTATTTAAGTAGATGGAGACCGGAATGCTCTTTACTTGTTGTTGATGATGATGATCATAATAGTCAAAGTGTTGGTGGGGAATGGTTTCAAGAATATCAGTCCCTAGCTGAAACTTTGTTTTCGGAATCATCAATTACAAAGGAGCGATCTGACTATGTTCGTAGAGAACTGACAAAAGAACTTACTAGGATTCTTAATGAGGTTAGAAATCTGCCTGAGACTGGTGGAGTCTGCATGAACATGACTGTTTCGCCAACCAGCTAG 2082 0.403 MTSIPSKNLWIRKQQCPCGDWKCYITYEGDAEEGSAAPELVKAEKASSGAMITPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRISPQLGIYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEALLCEKRENDILELLEACKIMKEADDNFVYDFTVDESDKVENIAWSYGDSVNANAMFGDVVYFDTTYRSITYGLLFGVWFGIDSYGRTIFFGCVLLQDETPQSFSWALQTFVRFMRGRCPQTILTDLDPGLRDAIRSEFPGTKHVIPQWNILYKVPSWFSIPLGSRYAEFKSEFDALFHIENTEEFELQWSQMISVFGLGSDKHTDLLYSVRASWAQPYVRGYFLARMATIAYSKSIDAFLKGIFTAHTCLRSFFEQVGISANFQHQAHQEAQYIHLKTCIPIEEHARSILTPFAFNALQQELLLVMQYATSEMANGSYIVRHFKRMDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRVFVIKNYFQLPDKYYLSRWRPECSLLVVDDDDHNSQSVGGEWFQEYQSLAETLFSESSITKERSDYVRRELTKELTRILNEVRNLPETGGVCMNMTVSPTS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00035 693 SMART 26again6 573 600 IPR006564 GO:0008270
Gabi4319g00035 693 Pfam MULE transposase domain 291 382 IPR018289 -
Gabi4319g00035 693 Pfam SWIM zinc finger 570 594 IPR007527 GO:0008270
Gabi4319g00035 693 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Gabi4319g00035 693 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 661 IPR031052 GO:0006355
Gabi4319g00035 693 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00035 Gabi-Chr4319 289793 292886 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi4319g00035 MULE 2.3e-16 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00035 - - aprc:113874854 1313.52