Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4319g00018 ATGCAAACATCCCAGAAACACCCATCTTCGGCTGGTATCCATTTATACCAGCAGCCTGTGCAAGACATTGATCCCTACACTCATTACCAAATATTACAAAGCAATTCATGCCATGATATCCATGATAGCAGCAGCCAGGGAACCACTGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACCCTGGAATCATACCCAGCAACCACTGGTCACATAGGTTGTGATTCTCCCTCCTATGCTAGTGTATCATCCAATAAGAGTCCTTTTTCTTCACAAGCTTCTCAGTCACACCATTCAGATCAGCACCAGTCATCAGACAACACCTATGGATCACCAATAAGTGTACACTCTAGTGCTGATGATAGCTATGAATTGAAACACAAACTTAGAGAACTGGAGGCTTCATTGTTGGGGCCTGAGTCAGAAATTGTTGACAGTTGTCACTGCTTCTTCGAGGGTGGCCTCCAAGAATCACCTCCAATTGCTCAATATAATTGGGCTCAGATTGCAAAAATGATCCCGAAGTTAGACTTGAGAGAAGTCCTCATTCGATGTGCACAAGCTGTGTCTGATAATGATATTCAAACAGCACTAGGCTTGATGGATAATGTTTTGGGAAAGATGGTATCAGTTGCTGGGGATCCAATGCAGAGGTTGGGTGCTTACTTGTTGGAGGGTCTAAGAGCAAGATTTGAATCATCAGGGAGTGTAATCTACAAAGCCTTGAAGTGTGAACAACCATTAAGCAAAGATCTGATGAGTTACATGCACATCCTGTATCAGGTTTGCCCATATTGGAAGTTTGCATACATATCAGCAAATGTTGTCATTGGAGAAGCAATGCAAAATGAATCCAGAATTCATATAATTGACTTCCAAATCACACAGGGCACACAGTGGTTGTTACTTATCCAGGCTCTTGCATGTCGTCCTGGTGGCCCTCCATTCCTTCGCGTAACCGGTGTTGATGATTCCCAATCATTTCATGCTCGGGATGGAGGACTTGATATTGTAGGAAAACGGCTCTCAGATTATGCAAAAACTTGTGGGGTGCCATTTGAGTTCCATAATGCTGCCATGTCTGGCTGTGATGTTAAACTAGAAAACCTTGTAGTTCGACCTGGGGAAGCTATAGCTGTGAATTTCCCTTTTGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCACAGAGACAGGCTATTGAGATTGGTAAAGAGCTTGTCGCCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACAAACACTTCTCCCTTTTTCCAAAGGTTTGTCGAGACCTTGAATTATTACACTGCTATGTTTGAATCAGTAGACGTGGCCCTCCTCAGAGACGATAAGCAAAGGATTAATGCAGAACAGCACTGTTTGGCTCGTGACATTGTCAACATGATAGCTTGTGAGGGGGCTGAGAGGGTGGAAAGGCATGAACTCTTAGGAAAATGGAGGTCTAGATTTTCTATGGCCGGATTTGCACCATGCCCTTTGAGTTCCTCAGCTACGGCTGCAGTCACAAATCTCTTGAATGAATTCAATGAAAATTATAGGCTTGAATACACAGATGGTGCTCTCTATCTATTCTGGAAGAATAGAGCTATGTGCACCTCTTGTGCCTGGAGATGTTACTGA 1656 0.4366 MQTSQKHPSSAGIHLYQQPVQDIDPYTHYQILQSNSCHDIHDSSSQGTTVSFETCKEQYFTLESYPATTGHIGCDSPSYASVSSNKSPFSSQASQSHHSDQHQSSDNTYGSPISVHSSADDSYELKHKLRELEASLLGPESEIVDSCHCFFEGGLQESPPIAQYNWAQIAKMIPKLDLREVLIRCAQAVSDNDIQTALGLMDNVLGKMVSVAGDPMQRLGAYLLEGLRARFESSGSVIYKALKCEQPLSKDLMSYMHILYQVCPYWKFAYISANVVIGEAMQNESRIHIIDFQITQGTQWLLLIQALACRPGGPPFLRVTGVDDSQSFHARDGGLDIVGKRLSDYAKTCGVPFEFHNAAMSGCDVKLENLVVRPGEAIAVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYTAMFESVDVALLRDDKQRINAEQHCLARDIVNMIACEGAERVERHELLGKWRSRFSMAGFAPCPLSSSATAAVTNLLNEFNENYRLEYTDGALYLFWKNRAMCTSCAWRCY 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4319g00018 551 MobiDBLite consensus disorder prediction 85 117 - -
Gabi4319g00018 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Gabi4319g00018 551 Pfam GRAS domain family 178 549 IPR005202 -
Gabi4319g00018 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 107 539 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4319g00018 Gabi-Chr4319 190078 193797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4319g00018 1 549 GRAS Transcription Factor Family AT4G17230 57.971 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi4319g00018 GRAS 1.2e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4319g00018 - - gmx:100819190 929.472