Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4318g00001 ATGAAGAATTCTACGAAAAATGGTGTAAGGCAGTACCACAAATCGGAACATCCACGCCTGCGTTGGACACCTGAACTCCATGAATACTTTGTTGAAGCTGTGGAAAATCTAGGTGGAAAACACAAGGCAACTCCAAAGCGCATTTTGCAGATGATGGAAGTGAAAGGACTGAGGATCTCTCACATTAAAAGCCATCTTCAGATGTACAGAAATATAAAGGACCATACAATTCTCGCTCCAATGTATCATTTGCTGGAAGGAAATGCACATGGTAACGATCTTCCAAGCTGCTCCGTTTGTTCACCCCAAAGATCACGTGGAACTAAATTAAGAGCATCAAAATATGAATCGAGGATTGTCAATATAGAAGAGAATAAAGGACTTTCACAAACCAGTGAAGATCATGATATAAATCAGGAGCCCGAGTCAAGTGCATGCTTACTTAGTGATATGTCAAATGAAGAAGAAAATAGTAGGACGAAGAAATTTCTAGATCTTTCATTCTCTTTTAGCACTCCGCTAATGCCAATGATGCATAATCATTTGTCTTCCCCAAACACAACAGACAATCATGTCGTTGATTCTAGTTCTATACACTCTCACGGGAGCAATAGCATAAACTTAGACCTAACAATTTGA 639 0.3928 MKNSTKNGVRQYHKSEHPRLRWTPELHEYFVEAVENLGGKHKATPKRILQMMEVKGLRISHIKSHLQMYRNIKDHTILAPMYHLLEGNAHGNDLPSCSVCSPQRSRGTKLRASKYESRIVNIEENKGLSQTSEDHDINQEPESSACLLSDMSNEEENSRTKKFLDLSFSFSTPLMPMMHNHLSSPNTTDNHVVDSSSIHSHGSNSINLDLTI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4318g00001 212 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Gabi4318g00001 212 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
Gabi4318g00001 212 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 72 IPR006447 GO:0003677
Gabi4318g00001 212 Gene3D - 17 73 - -
Gabi4318g00001 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Gabi4318g00001 212 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 143 IPR046955 GO:0003700
Gabi4318g00001 212 FunFam Myb family transcription factor 16 74 - -
Gabi4318g00001 212 MobiDBLite consensus disorder prediction 181 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4318g00001 Gabi-Chr4318 9473 14357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4318g00001 8 70 G2-like Transcription Factor Family AT1G14600 69.841 1.50e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4318g00001 Myb_DNA-binding 4.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4318g00001 - - ccaj:109790621 288.5