Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4316g00060 ATGCAGGCCAGGGAGATAACAGAACTCAATTATTTACTCCCTTCAGACCCTTCTCCTTACCAAGGTCACTACAACAATATGATTCAGACCAACATCCCCACATTTCAACTTCAAAAATTCTCGAATCAATTCTATGGTTTCCAGAACCTTTCTCAAGTACTTGGAGACTTTAGTCCTCCTCAATCCTCATGTATCAGCAGCAATTCAACTTCTGATGAAGCAGATGAGCAACAACAAAGCCTCATCAATGAGAGGAAACACAGAAGGATGATATCAAACCGAGAATCTGCACGCCGGTCACGGATGAGGAAGCAGAAGCACCTTGATGAGATGTGGTCACAGGTTGTTTGGCTTAGGAATGAGAATCACCAGTTAATAGATAAGCTGAACAATTTGTCAGAGTCACATGATAAAGTACTTCAAGAGAATGTTCAACTGAGAGAGGAAGCTTTAGAACTTCGTCAAATGATATGTGACATGCAGCTACGTAGTCCTTGCCCCCCCTTGAGCCCCCTTGAAGATCTTCCTTGCACATCACCACCCTTTGTCACATCTCATTCATCAAACCAATCAATCACAAGTTCTATTGACCTTCTTGGTTAA 603 0.4229 MQAREITELNYLLPSDPSPYQGHYNNMIQTNIPTFQLQKFSNQFYGFQNLSQVLGDFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDEMWSQVVWLRNENHQLIDKLNNLSESHDKVLQENVQLREEALELRQMICDMQLRSPCPPLSPLEDLPCTSPPFVTSHSSNQSITSSIDLLG 200
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4316g00060 200 CDD bZIP_plant_GBF1 86 137 IPR045314 GO:0003700|GO:0006355
Gabi4316g00060 200 MobiDBLite consensus disorder prediction 78 102 - -
Gabi4316g00060 200 MobiDBLite consensus disorder prediction 58 102 - -
Gabi4316g00060 200 SUPERFAMILY Leucine zipper domain 85 135 IPR046347 GO:0003700|GO:0006355
Gabi4316g00060 200 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 167 IPR044521 -
Gabi4316g00060 200 Pfam bZIP transcription factor 85 143 IPR004827 GO:0003700|GO:0006355
Gabi4316g00060 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 88 103 IPR004827 GO:0003700|GO:0006355
Gabi4316g00060 200 MobiDBLite consensus disorder prediction 58 77 - -
Gabi4316g00060 200 Coils Coil 122 156 - -
Gabi4316g00060 200 SMART brlzneu 81 145 IPR004827 GO:0003700|GO:0006355
Gabi4316g00060 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 83 146 IPR004827 GO:0003700|GO:0006355
Gabi4316g00060 200 Gene3D - 83 139 - -
Gabi4316g00060 200 FunFam BZIP transcription factor 83 134 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4316g00060 Gabi-Chr4316 604385 604987 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4316g00060 44 165 bZIP Transcription Factor Family AT3G30530 70.400 3.59e-53 166
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4316g00060 bZIP_1 1.2e-13 CL0018
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4316g00060 - - aprc:113863596 303.908